Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04209 ATGAGTGTGAAGGTAGCAAAAGATGGCATGGTGGTTGGAAAATACGAGTTGGGGAAAACCATCGGAGAGGGAAGCTTTGCGAAGGTGAAGTTGGCCAGAAACGTGAACACCGGGAACAACGTTGCCATCAAAATCCTGGACCGTAAGAATGTCCTCCGCCACAACATGATGGAACAGCTCCAGCGAGAAATATCAACCATGAAACTCATCAATCACCCAAACGTTGCTAAAATATTTGAGGTGATGGCTAGCAAAACAAAGATTTACATTGTTCTGGAGTTACTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGTAGACTTAAAGAAGATGAAGCTAGAACTTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATCTGAAGCCTGAGAATCTTCTTCTGGACTCGAACAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACTCGCAGAAAGAGGATGAACTGCTCCACACTGCATGTGGAACCCCAAATTATGTTGCTCCTGAGGTGATTCACAATAGAGGCTATGCTGGTTCAACATCTGACATCTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTTCTTGCCCTTTGATGGCCCAACTCATATGGCTCTGTTCAGGAAAATTATCAAGGCAGAATTCTCTTGTCCATCATGGTTTCCACCACAGGCAAAGGCACTGCTGAAACGCATTCTAGACCCAAACCCTCTAACGAGGATAAAAATTCCCGAGCTCTTAAAAGACGAGTGGTTCAAGAAAGGATACAAACCAACATCTTTCACTGAGGAAGAGGACCTAAGTTTAGATGATGTAGCCGTCGCTTTCAACGAGTCTAATGTACTCATTTTTAGCCAACGTTTGTAG 915 0.4339 MSVKVAKDGMVVGKYELGKTIGEGSFAKVKLARNVNTGNNVAIKILDRKNVLRHNMMEQLQREISTMKLINHPNVAKIFEVMASKTKIYIVLELLDGGELFDKIAAKGRLKEDEARTYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYSQKEDELLHTACGTPNYVAPEVIHNRGYAGSTSDIWSCGVILFVLMAGFLPFDGPTHMALFRKIIKAEFSCPSWFPPQAKALLKRILDPNPLTRIKIPELLKDEWFKKGYKPTSFTEEEDLSLDDVAVAFNESNVLIFSQRL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04209 304 Gene3D Transferase(Phosphotransferase) domain 1 6 299 - -
Phac9g04209 304 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phac9g04209 304 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04209 304 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 279 - -
Phac9g04209 304 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04209 304 FunFam Non-specific serine/threonine protein kinase 8 302 - -
Phac9g04209 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Phac9g04209 304 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Phac9g04209 304 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04209 304 PIRSF ILK 6 265 - -
Phac9g04209 304 SUPERFAMILY Protein kinase-like (PK-like) 11 279 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04209 Phac-Chr9 39744163 39748618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04209 12 303 CBL-interacting serine-threonine protein kinases AT1G01140 70.847 2.11e-160 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac9g04209 Pkinase 8.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04209 - - gmx:100777218 517.309