Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04208 ATGAGTGTGAAGGTAGCAAAAGATGGCATGGTGGTTGGAAAATACGAGTTGGGGAAAACCATCGGAGAGGGAAGCTTTGCGAAGGTGAAGTTGGCCAGAAACGTGAACACCGGGAACAACGTTGCCATCAAAATCCTGGACCGTAAGAATGTCCTCCGCCACAACATGATGGAACAGCTCCAGCGAGAAATATCAACCATGAAACTCATCAATCACCCAAACGTTGCTAAAATATTTGAGGTGATGGCTAGCAAAACAAAGATTTACATTGTTCTGGAGTTACTTGATGGGGGAGAGCTATTTGACAAAATAGCTGCAAAGGGTAGACTTAAAGAAGATGAAGCTAGAACTTATTTCCAACAACTTATTAATGCTGTTGACTACTGCCATAGTAGAGGCGTGTATCACAGAGATCTGAAGCCTGAGAATCTTCTTCTGGACTCGAACAGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACGTACTCGCAGAAAGAGGATGAACTGCTCCACACTGCATGTGGAACCCCAAATTATGTTGCTCCTGAGGTGATTCACAATAGAGGCTATGCTGGTTCAACATCTGACATCTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTTCTTGCCCTTTGATGGCCCAACTCATATGGCTCTGTTCAGGAAAATTATCAAGGCAGAATTCTCTTGTCCATCATGGTTTCCACCACAGGCAAAGGCACTGCTGAAACGCATTCTAGACCCAAACCCTCTAACGAGGATAAAAATTCCCGAGCTCTTAAAAGACGAGTGGTTCAAGAAAGGATACAAACCAACATCTTTCACTGAGGAAGAGGACCTAAGTTTAGATGATGTAGCCGTCGCTTTCAACGAGTCTAATAAAAATCTAGTGACAGAAAAGAAAGTGAAACCCGTCTACATTAATGCTTTTGAGTTCATTTCTAGGTCACAAAGTTTCAATCTTGACAACTTGCTCGAGATGCAACCGGATACTCCCACGTCGTTCGGCCTTGACCGAGCATTGAGCTTCCATCCGGTCGTTTTGTCCTGA 1059 0.4363 MSVKVAKDGMVVGKYELGKTIGEGSFAKVKLARNVNTGNNVAIKILDRKNVLRHNMMEQLQREISTMKLINHPNVAKIFEVMASKTKIYIVLELLDGGELFDKIAAKGRLKEDEARTYFQQLINAVDYCHSRGVYHRDLKPENLLLDSNSVLKVSDFGLSTYSQKEDELLHTACGTPNYVAPEVIHNRGYAGSTSDIWSCGVILFVLMAGFLPFDGPTHMALFRKIIKAEFSCPSWFPPQAKALLKRILDPNPLTRIKIPELLKDEWFKKGYKPTSFTEEEDLSLDDVAVAFNESNKNLVTEKKVKPVYINAFEFISRSQSFNLDNLLEMQPDTPTSFGLDRALSFHPVVLS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04208 352 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phac9g04208 352 SUPERFAMILY Protein kinase-like (PK-like) 11 283 IPR011009 -
Phac9g04208 352 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04208 352 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 329 - -
Phac9g04208 352 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04208 352 FunFam Non-specific serine/threonine protein kinase 8 307 - -
Phac9g04208 352 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04208 352 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Phac9g04208 352 Gene3D Transferase(Phosphotransferase) domain 1 6 327 - -
Phac9g04208 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Phac9g04208 352 FunFam Non-specific serine/threonine protein kinase 6 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04208 Phac-Chr9 39744163 39750921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04208 12 331 CBL-interacting serine-threonine protein kinases AT1G01140 71.517 3.23e-175 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac9g04208 Pkinase 1.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04208 - - gmx:100777218 563.148