Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04189 ATGGCACACGACTTAACGGGGCAGCTTGTGGGTTCAGAGATACATGGGTTTCATACCTTGCAGGATCTGGATGTTACTAATACTATGGAGGAAGCAAAAAGCAGATGGCTTCGTCCAAATGAGATTCATGCCATGCTCAGTAATCACAAATATTTCAAGATCAATGCCAAGCCAGTGCATTTACCCGAAAGTGGTACTATTGTATTATTTGACCGCAAGATGCTTAGAAACTTCAGAAAAGATGGTCACAATTGGAAAAAGAAAAGTGATGGGAAAACTGTTAAAGAAGCTCACGAACACTTAAAAGTTGGCAATGAAGAAAGGATCCATGTATACTATGCACATGGCCTAGACAATCCAACCTTCGTTCGTAGATGTTATTGGTTGCTTGATAAGAGTTTGGAGCACATAGTCCTTGTTCATTATCGTGAAACAAAAGAGATACAATTGCAAAGTTCTCCTGTTACACCTGTAAATTCAAATTCAAGTTCTGTCTCTGATCCAGCTGCATCTTGGATTCCATCAGAAGACTTAGATTCTGGGACAAAAAGTGCCTACAGTCCTGAGCTTAATGTCAATTTAACAGTCAGAAGTTATGAACAGAAGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTTCAAATGCCAACACTTCTACTACATCTAGTGGAGGCAATGTTCCACGTTCAAATAACCAAAATCAAAGTTTACTGAGTGGAAACTTTGGCAATGCATCCAGTACTCCTTCAGCAGAAGTTCCTTCTTTAGGTAATATAACTCACTCAGTTTCTGGGAGCAACGGTGTTCCTTACGGTTTCTCTGAAACTGTTAATCTGCTTAAAAATAGTCCTACATCTCCCTGTGGTGTTGACACCTTGGGCACTTTGGTCAATGAAGGCTTGCAAAGTCAGGACAGCTTTGGAATGTGGATGAACAACATCATATCAGATAAACCGTGTTCCATGGACGAGTCAGCTCTTGAAACATCGATTTCTTCTGTTCATGAACCATATTCATCACTGGTGGTAGATAATCAGCTATCTTCTCTGCCTGAACAAGTATTTAATCTCACAGAGGTGTCCCCTGCGTGGGCATCTTCCACTGAGAAAACAAAGGTCCTGGTAACTGGATATTTTCATAGTAACTATCAACACCTTGCAAAGCTCAACCTAGTGTGTGTCTGTGGTGATGTAAGTTTTCCTGTAGAAATTGTTCAGGTTGGGGTTTACCGATGCTGGGTACCACCACACTCCCCTGGATTGGTCAATATCTATTTGAGCTTTGATGGCCACAAGCCTATTAGCCATGTTGTTAATTTTGAGTATCGTACTCCCATTTTGCATGATCCAACTGCTGCAATGGAAGAGAAATACAACTGGAGCGAATTTCGACTTCAGATGAGGCTTGCTCATTTGCTCTTTTCTACAGACAAGACCCTTGATATTTTCTCTAGTGTAGTATCACCAAATGCAGTAAAAGAGGCTAGAAGATTTTCCTTCAAAACATCATTTATCTCCAAAAGCTGGCAATACTTGTTGAAGTCAATTGATGACAAAACAACTCCATTTTCACAAGTAAAAGATAGCTTGTTTGAAATTGCATTGAAAAACAAATTAAAGGAATGGCTTTTAGAACGAATTGTTGTAGGCTGCAAGAGTACTGAATATGATTCTCAAGGGCAAGGTGTTATTCATTTGTGTGCAGTACTTGGATATAATTGGGCAATCACCTTATTTTCTTGGTCAGGCTTGTCGCTAGACTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCTTATTATGGAATGGAGAAAATGGTTGCAACTCTGCTGTCTGCTGGGGCAAGGCCAAATGTGGTCACCGATCCTACTCCGCAAAATCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATGAACGGGTTTGATGGCTTAGCTGCTTACCTTTCCGAAAAGTCTCTGGTTGAGCAGTTCAATGACATGAGCTTGGCTGGAAATCTCAGTGGCACACTGGAAACTGGCTTAACTGATCCAGTAAATACTGAAGACCTTACTGAGGAACAGATGTACTTAAAGGATACATTGGCAGCTTATCGAGTGGCTGCTGGGGCGGCAGCACGCATTCAAGCTGCATATAGGGAGCATTCTCTAAATTTAAAATACAAGACAGTTGAATTTAGCAGTCCAGAGGATCAAGCACGTCAAATAGTAGCAGCAATGAAGATTCAACACGCCTTTCGCAAGTATGAGACAAGGAGATCAAATGCAGCTGCTGTTCGAATTCAACATAGATTCCGTACACGGAAACACCGTAGAGAATTTCTTAACATGCGGCGTCAGGCTATTAAAATTCAAGCTGCTTTCAGGGGCTTTCAAGTTCGGAGGCAATATAAAAAAATCATATGGTCTGTTGGGGTGCTAGAGAAAGCAATTCTTCGATGGCGGTTAAAGAGAAAAGGCTTCCGTGGTCTCCAGGTTAACTCTGCTGAGGATGGGAAGCAGGAAGAGGGTGAAGAGGAGGATTTCTTTAGGACCGGCCTGAAACAAGCCGAAGAACGTGTCGAGAGGTCTGTTGTACGTGTGCAGGCCATGTTCCGATCTAAGAAAGCACAAGAAGAATATAGAAGAATGAAGCTAGCATATAGTCAAGCAAAGCTGGATCTGGAAGTTGAAGATTTCATCACCTCTGAAGTTGACCTGTTATCTGACATATAG 2730 0.4172 MAHDLTGQLVGSEIHGFHTLQDLDVTNTMEEAKSRWLRPNEIHAMLSNHKYFKINAKPVHLPESGTIVLFDRKMLRNFRKDGHNWKKKSDGKTVKEAHEHLKVGNEERIHVYYAHGLDNPTFVRRCYWLLDKSLEHIVLVHYRETKEIQLQSSPVTPVNSNSSSVSDPAASWIPSEDLDSGTKSAYSPELNVNLTVRSYEQKLHEINTLEWDDLVVSNANTSTTSSGGNVPRSNNQNQSLLSGNFGNASSTPSAEVPSLGNITHSVSGSNGVPYGFSETVNLLKNSPTSPCGVDTLGTLVNEGLQSQDSFGMWMNNIISDKPCSMDESALETSISSVHEPYSSLVVDNQLSSLPEQVFNLTEVSPAWASSTEKTKVLVTGYFHSNYQHLAKLNLVCVCGDVSFPVEIVQVGVYRCWVPPHSPGLVNIYLSFDGHKPISHVVNFEYRTPILHDPTAAMEEKYNWSEFRLQMRLAHLLFSTDKTLDIFSSVVSPNAVKEARRFSFKTSFISKSWQYLLKSIDDKTTPFSQVKDSLFEIALKNKLKEWLLERIVVGCKSTEYDSQGQGVIHLCAVLGYNWAITLFSWSGLSLDFRDKFGWTALHWAAYYGMEKMVATLLSAGARPNVVTDPTPQNPGGCTAADLAYMNGFDGLAAYLSEKSLVEQFNDMSLAGNLSGTLETGLTDPVNTEDLTEEQMYLKDTLAAYRVAAGAAARIQAAYREHSLNLKYKTVEFSSPEDQARQIVAAMKIQHAFRKYETRRSNAAAVRIQHRFRTRKHRREFLNMRRQAIKIQAAFRGFQVRRQYKKIIWSVGVLEKAILRWRLKRKGFRGLQVNSAEDGKQEEGEEEDFFRTGLKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAYSQAKLDLEVEDFITSEVDLLSDI* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04189 909 MobiDBLite consensus disorder prediction 220 262 - -
Phac9g04189 909 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Phac9g04189 909 Gene3D - 520 664 IPR036770 -
Phac9g04189 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 704 809 IPR027417 -
Phac9g04189 909 SUPERFAMILY Ankyrin repeat 534 657 IPR036770 -
Phac9g04189 909 ProSiteProfiles IQ motif profile. 740 769 IPR000048 GO:0005515
Phac9g04189 909 SMART iq_5 758 780 IPR000048 GO:0005515
Phac9g04189 909 SMART iq_5 858 880 IPR000048 GO:0005515
Phac9g04189 909 SMART iq_5 781 803 IPR000048 GO:0005515
Phac9g04189 909 Pfam IQ calmodulin-binding motif 784 803 IPR000048 GO:0005515
Phac9g04189 909 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Phac9g04189 909 MobiDBLite consensus disorder prediction 153 170 - -
Phac9g04189 909 Gene3D Immunoglobulins 354 449 IPR013783 -
Phac9g04189 909 SMART CG_1_2 29 146 IPR005559 GO:0003677
Phac9g04189 909 Gene3D - 758 806 - -
Phac9g04189 909 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 888 - -
Phac9g04189 909 Pfam Ankyrin repeats (3 copies) 537 624 IPR002110 GO:0005515
Phac9g04189 909 ProSiteProfiles Ankyrin repeat region circular profile. 595 624 - -
Phac9g04189 909 ProSiteProfiles IQ motif profile. 782 806 IPR000048 GO:0005515
Phac9g04189 909 ProSiteProfiles IQ motif profile. 860 888 IPR000048 GO:0005515
Phac9g04189 909 FunFam calmodulin-binding transcription activator 5 525 665 - -
Phac9g04189 909 SMART ANK_2a 595 624 IPR002110 GO:0005515
Phac9g04189 909 SMART ANK_2a 634 665 IPR002110 GO:0005515
Phac9g04189 909 Coils Coil 872 892 - -
Phac9g04189 909 ProSiteProfiles Ankyrin repeat profile. 595 627 IPR002110 GO:0005515
Phac9g04189 909 FunFam Calmodulin-binding transcription activator 5 354 450 - -
Phac9g04189 909 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Phac9g04189 909 MobiDBLite consensus disorder prediction 153 178 - -
Phac9g04189 909 SUPERFAMILY E set domains 359 446 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04189 Phac-Chr9 39584068 39595900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04189 29 892 CAMTA Transcription Factor Family AT3G16940 55.121 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Phac9g04189 CG-1 5.9e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04189 K21596 - gmx:100819198 1459.51