Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04179 ATGGGAGTTGAAAAAGAAGGGACGAAAAGTGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACGACAAAGTCCCGTAAGAAATTATTTGCGGCCAAGTCGGATTTACCAGAGACTTTAAAACAGGGAAGAAGAGTCGATTACAATGTGGCAATGCCAATGACACAGTCCTCCTATCTGGTTGATGGCGATGAAAATGGATTTGGGGTAAGTCTAAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAACATGTGGTACAAGGGCTCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTTCTTCAAGTATTTCTGATCCTTATGCTACCCCATATTTTGATACCCGTTCCCTTCAAGATGCTCAGTACTTCAAGAAAAACTTTGATCACCAGCATGACCATCAGACCCCATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGGCTCATCTAGGAGCTTCATTGAGCCAAAACAGCAAAAGGCCATTACTAGACCAATTGAAAAGTTCCAAACAGAAGTTTTGCCTCCAAAATCAGCAAAATCAATTCCTGTTACACACCATAAACTCTTGTCCCCTATTAAGAGTCCCAGCTTTGTTCCCACCAATAATGCTGCATATATAATGGAGGCTGCGGCAAGAATTATTGAGCCTGGTTCCCATGCTAGTACCAAGGCTAAGACACCTCTGGTAGCATCATCAACACCACTGAGAGTGAGAGAACTAAGAGATAAGGTGGAGGCTTCACAGAAGGGACCTTTGTTTGGGCCACCCTCCATGACCTCCAGAGCTCGAGATCTGAAAGAGAAAAGAGAACTTTCTCAAAGAGCAACCAGACTTTCTGAATCATGTCAAAGATCAGTCGAGTCAAATGCCGCCAAGTATCTCAAAGGACAATCTTTGAACAGAAGCTGGAATGGATCTGTGGATATACCCATCAAATCTCCTACACAAGAGGAAGAAGTTTCTTCTTTGAAGAATAATAAGGGGAAGTCCATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAAAAGGGAAGGTTTGAGTTTGACTGGTGGAAAAAGTATGACGGCCCAAAAAGAGCATCCTGACTTGAAATCCAACCAACCAATGAAGGCAAATGTGCAGAAAAATTTGCACAAGAAATCTTCTGCTCAAAGTTCATCTGGTGCTCTTAGACAGAATAATCTGAAACAGAATTATTCTACTGACAAAGACAAATTACCGTCAAAGCCATTGGCGACCAATTCCCACAGTAGAAAAGTTCTGACTGGGGACTCCACTCACGGACGTCATAGAAGCTCCAGTAATAAATCCATTGCAAAATCTAAAGTTGGATCCAGAAAGTCAGCGATGGAGGTGACTGGTAGTGAAAAGGAAGTTTTATACACCAGCACAAACAATTTTCCTAGGAAGAAAAGGTCTACAGATAAGGACTGGAATGATAGGGTTGTGGACAATTTGTTCATTGAAAAAACTCAGAAGCCTGCTAAGTCTAACCTAGTGAGTAATAAACAAAATTGTTGGGCTGAAGATGTAAAAAAGAAGGACATGGATGTAGTTTCATTCACATTCACCACACCATTAACTAGGAGCAATCCAGGTTTTGAGACATCTGGACAAGCTGGCCAAAATACTAATGGTCTTTCCCTGGATCAACGCATTAAAAGGGTGTTGCTTGAATCAGACAATACAAGGTCCCCTATAGGATACAATTTGATTGGTGGTGGTGATGCCTTGGGTGTCCTTTTGGAACAGAAATTGAGGGAATTAACATGTATGGAAACAACTTGTCATGACTCTTCTAAAGTGAGGCAGCCTGCCAGTACTGCTACTATATCAGATGAGCAAGTAGCCGGCTTGAATGTAGTTAACTTCAATCCAAGGTTGCAACAAAAAAAAGACCAAGATGTCTTATTTACAGACAAGTTAAGCAACAACTATGATGCAGACATCTCCTTCAGGGGTCTTCCTGAATTATTCAAGCAGAACTCATGGATTGATGAGATGGAACAACAGTTACTCAATTGCAGGAACCCAAGTCCAATCTCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGGTCATCTGTTCAAGCTCAAGAAGTTCATGGCTTGAATTTTTCAAGGAAGTTCTATGCTTGTGAAACTGATGCTGAGTTATCCGATTCAGCATCTTCAACCTCAGCTGGGAACATGATGAAGCACACAAGTAATGCCACAAGGTTTGGTAGCTCAAGCACATGGGAGTTGGACTATGTGAAAGATATATTGTTTGGAAGGCCGCAAGGGAGGGTTTAA 2385 0.4159 MGVEKEGTKSGGGYVGGFFQLFDWTTKSRKKLFAAKSDLPETLKQGRRVDYNVAMPMTQSSYLVDGDENGFGVSLRGSCDHSYASSVTDDETCGTRAPSVVARLMGLDSLPSSSISDPYATPYFDTRSLQDAQYFKKNFDHQHDHQTPYSGKLVEKVEGSSRSFIEPKQQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSHASTKAKTPLVASSTPLRVRELRDKVEASQKGPLFGPPSMTSRARDLKEKRELSQRATRLSESCQRSVESNAAKYLKGQSLNRSWNGSVDIPIKSPTQEEEVSSLKNNKGKSISLAIQAKVNVQKREGLSLTGGKSMTAQKEHPDLKSNQPMKANVQKNLHKKSSAQSSSGALRQNNLKQNYSTDKDKLPSKPLATNSHSRKVLTGDSTHGRHRSSSNKSIAKSKVGSRKSAMEVTGSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQKPAKSNLVSNKQNCWAEDVKKKDMDVVSFTFTTPLTRSNPGFETSGQAGQNTNGLSLDQRIKRVLLESDNTRSPIGYNLIGGGDALGVLLEQKLRELTCMETTCHDSSKVRQPASTATISDEQVAGLNVVNFNPRLQQKKDQDVLFTDKLSNNYDADISFRGLPELFKQNSWIDEMEQQLLNCRNPSPISVLEPSFSIESCESSLSTDVTSTEGSKLWSSVQAQEVHGLNFSRKFYACETDAELSDSASSTSAGNMMKHTSNATRFGSSSTWELDYVKDILFGRPQGRV* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04179 794 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 786 - -
Phac9g04179 794 MobiDBLite consensus disorder prediction 255 295 - -
Phac9g04179 794 MobiDBLite consensus disorder prediction 357 467 - -
Phac9g04179 794 MobiDBLite consensus disorder prediction 316 339 - -
Phac9g04179 794 Pfam DUF761-associated sequence motif 85 116 IPR032795 -
Phac9g04179 794 MobiDBLite consensus disorder prediction 380 414 - -
Phac9g04179 794 MobiDBLite consensus disorder prediction 420 434 - -
Phac9g04179 794 MobiDBLite consensus disorder prediction 273 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04179 Phac-Chr9 39529180 39534768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04179 16 603 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 32.338 1.08e-57 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04179 - - gmx:102669513 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04179 9 39529180 39534768 Phac9g04179 9 39529180 39534768 ECH