Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04177 ATGAGTGGTGCATCAGAAAACCCTATTCATGAGAATAGTGAAGGTAAAGCTTTTTCTTATTCTTCTTCTTCTTCTTATTCCTCTTCATCATCAACAACACTGAAACTGTTCGGTTTTCCATTAACCCTACCAAGTAGCACTGTTTCTCCTCATCACCCTTACAAGAGATTCAAGTGCCACTTCTGTTACCGTGAATTCGCTAATTCCCAAGCTCTCGGTGGCCACCAGAACGCCCACAAGAGAGACCGCCAGAAAGCTGCTCTCTCACCCTTCACTTACTTTCTCCACCGTCAACGTTTCACACCACCTACTCATTCTCCGATCGTGCTTCCGCACGGAGGATCAAGACCGTTGGTTGCTCCACGTGATCATCATCATCATAGGGTTGGGTTAGTGAGGCCAATGGGTGCAAGTGCAATTAGCATTAGCACAGTGAGGAAAGTACACAGTACTATTAATGGTGGTGATGGTGATAGTGGTGTTGATCTTAACTTGAGTTTGGCTAACAATCCACCTTCCAAGTTTATGGACGAGGAATTGGGCAGGTGTAGGAGAACTTGA 561 0.4545 MSGASENPIHENSEGKAFSYSSSSSYSSSSSTTLKLFGFPLTLPSSTVSPHHPYKRFKCHFCYREFANSQALGGHQNAHKRDRQKAALSPFTYFLHRQRFTPPTHSPIVLPHGGSRPLVAPRDHHHHRVGLVRPMGASAISISTVRKVHSTINGGDGDSGVDLNLSLANNPPSKFMDEELGRCRRT* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04177 186 SUPERFAMILY beta-beta-alpha zinc fingers 55 83 IPR036236 -
Phac9g04177 186 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Phac9g04177 186 PANTHER ZINC FINGER PROTEIN 5 22 88 IPR044299 GO:0010090
Phac9g04177 186 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Phac9g04177 186 Gene3D Classic Zinc Finger 27 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04177 Phac-Chr9 39521943 39522716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04177 55 124 C2H2 Transcription Factor Family AT3G58070 45.205 5.69e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04177 - - vun:114162545 235.343