Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04172 ATGTCCATGCATGTCCACGTCTTCTTCTTCTTAACGGTTGCCATCTTTTCGGCAACTTCATCCATGTCTCAGTCGCAAACCGCAGCTTCCTGCAATGGAATATTCGTGTCGTACGTCTACACTGGCGGCGAGAGGCTGCCGCCGAACGTTTCCGACGCGGCGGAGCAGCCATACCGGTTCGAGTCCACGCTGACAGTGCTGAACACCGGGTTGGAGGAGCTGAAGTCTTGGAAGGTGTTCGTGGGGTTTCAGCACAGCGAGTGGTTGGTGTCGGCGTCGAACGCGGTGCTCGCGGACGGTACGAGTCTTCCCGCTGCGGTTGGGAACGGCACCGTGTTGAGTGGGTCGACGGTGAGGGATCTGAAGACGGCGGTGGCTACCGCCGGCGATTTGACCCAGATGCAGGTTCAGGTGGAGTTGTTGGGGAGCTTGCTTGGGGTGGCGCCTCCTTCTGTGCCGATGCCTCGGTCGTTAACTTTGGCTAACGATGGATTTTTGTGTGGTCAACCCTCTCGTGAAGGAAGCAATGAAACTCATGTGTGTTGCACAAGGGATCCCAGTTTCAAAACAAACATTAGCACGGATGAAGAGTTTCTACCCCGTGAGAAGGGTGACCTTAGCATCACATACGACATCATCAGAACCTACGATACCAATTACTGGGCAGAGGTTACAATCGCAAACCACAACCCTTTAGGTCGTCTTGACAACTGGAGACTAAGCTGGGACTGGCAAAACGACGAGTTCATCTACACAACAAAGGGTGCATTTCCATTGAAAGTGGATTCCTCTGAATGTGTTTTCGGTTCTCAAGGTAATTTCTACAAGGAACTCGACTTTGCCAACGTGTTGAACTGTGAAAGAAGGCCAACCATAGTGGATCTTCCTCCCTCAAGGTTCAACGATTCAGAACTCGGTCAAATCCCATTCTGCTGCAGGAATGGCACCATCTTGCCACCAACCATGGACCCCAGCATGTCAGCTTCAAGGTTCCAAATGCAAGTGTTCAAAATGCCACCCAACCTTAACCGCTCCACGCTCACAGCTCCTCGTAACTGGGAGATAAAGGGCACCTTTAACCCTCACTATGAATGTGGCCACCCCATAAGGGTTAGTCCAAGTGAATCCCCTGACCCTACTCACTCTTCATCAAACAAATCATCAATTGCAAGTTGGCAAGTGGTGTGCAACATCACAAACACAAACCGTGAAACACGCAAGTGCTGTGTTTCCTTCTCAGCTTATTACAATGAATCTGTTATCCCATGCAAGACGTGTGCTTGTGGATGTCCAAGTAATCCGGGGAGAACATGCAGCGCAACTTCACAAGCCATGTTGCTTCCACCAGAGGAACTTCTTGTCCCTTTTGAGAACAGAACTAAAAAGGCCGTTTCTTGGGCTGAGATACAGAGTTTACCAGTGCCTAATCCCATGCCTTGTGGTGATAACTGTGGTGTGAGCATAAACTGGCACGTGGCTACAGATTACCGAAAAGGGTGGAGCGCGAGGGTGACACTTTTCAACTGGGGTGAGACTAGTTTTGCTGACTGGTTTGCTGCAGTGCAGATGGAGAAAGCTGCTAAGGGGTTTGAGGAAGTGTACTCCTTCAATGGAAGCCTTTTGGAGAGTGTGGAGAACACGATCTTCATGCAAGGGAAAGAGGGGTTGAATTTTCTTGTGGCGGAAACGGATGGATCCAACCCTCGGAAAGATCCTAGGGTGCCGGGGAAACAGCAATCAGTAATCTCCTTTACCAAGAAGGAGACTCCTGGAATCAATGTGGTTGGTGGTGATGGGTTTCCAAGTAAAGTGTTCTTCAATGGTGAGGAATGCTCTCTTCCTTCGGTGTTACCAAGCAGTGTTGCGAGACCGGAGGTTTCATTGGCTACTACGATGTTCTTAGTGATGTTGTTGTCGATCATCTTCATGTCAAAGTAG 1938 0.5005 MSMHVHVFFFLTVAIFSATSSMSQSQTAASCNGIFVSYVYTGGERLPPNVSDAAEQPYRFESTLTVLNTGLEELKSWKVFVGFQHSEWLVSASNAVLADGTSLPAAVGNGTVLSGSTVRDLKTAVATAGDLTQMQVQVELLGSLLGVAPPSVPMPRSLTLANDGFLCGQPSREGSNETHVCCTRDPSFKTNISTDEEFLPREKGDLSITYDIIRTYDTNYWAEVTIANHNPLGRLDNWRLSWDWQNDEFIYTTKGAFPLKVDSSECVFGSQGNFYKELDFANVLNCERRPTIVDLPPSRFNDSELGQIPFCCRNGTILPPTMDPSMSASRFQMQVFKMPPNLNRSTLTAPRNWEIKGTFNPHYECGHPIRVSPSESPDPTHSSSNKSSIASWQVVCNITNTNRETRKCCVSFSAYYNESVIPCKTCACGCPSNPGRTCSATSQAMLLPPEELLVPFENRTKKAVSWAEIQSLPVPNPMPCGDNCGVSINWHVATDYRKGWSARVTLFNWGETSFADWFAAVQMEKAAKGFEEVYSFNGSLLESVENTIFMQGKEGLNFLVAETDGSNPRKDPRVPGKQQSVISFTKKETPGINVVGGDGFPSKVFFNGEECSLPSVLPSSVARPEVSLATTMFLVMLLSIIFMSK* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04172 645 PANTHER COBRA-LIKE PROTEIN 7 20 642 - -
Phac9g04172 645 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
Phac9g04172 645 SUPERFAMILY Carbohydrate-binding domain 202 250 IPR008965 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04172 Phac-Chr9 39471855 39474041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04172 31 628 COBRA Gene Family AT4G16120 64.013 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04172 - - vum:124836920 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04172 9 39471855 39474041 Phac9g04172 9 39471855 39474041 ECH