Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04157 ATGGAGCAAGATGACGATGACGGTGATGACGAAACAATCCCCTTGCATACTGATGAAACTCATGAAAGTGCTAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATTCGACCAGCCTTGGGAAGACAGCAGTCTATTGCAGAGAGGGCAAAGAGAGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCCTGAGGTTTGCAGGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGCCCTAAGCTAAAGGAAGAATATGTGATGGTGAAACACCTGCCCAAAATCCAGAAGGATGAGGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGATCCTTTTGATACACAGCCTCTGGACATAATTGTTTTTGATGTACTGCCTGCATCGGATGGTAATGGGGATGGCCGTTTATCACTGGCAAGTGAAGTGAAAGAACGGAATCCATTACGTCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAGTAGAAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCCGGACTCAGACCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGAGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGATAACCATATTTGCTTTATCGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCGGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTAGACCGTGAAAAATTTCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCATGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAGCAAAGCTCCATATGAGGAAGCTATACCCTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTGAAAGTGGGAACATAGACAATCCAAGAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATGCTCATGAAGAAGACCAAAAATTGAATGGCGTAGTCTCCTCTTCACATTACCTGGACAAGCCAAGAAAGATCAGCAGTGGTCTTCCCTTTTCATTCCGCAAGGCCAAAGTTGTAGCACTTGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGATCGTGAGAAAATGCCTCTAGATAGAGTGGCTCATTCTGATTTGCAAAATACAGATCCAGAATGGTGGGAGACGCAAGAACGAGGTGACCAGGAAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGTCGTTGCCAAGTTATTAGGAGCGTGAGTCAATGGTCTGCTGGAACAAGTCAGACCGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCCGGGGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTGTATCGACGAATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGGGGGCAGAACTCTATCTTGCATAATCTTTATGAACTTCTTGGTCCTAAGATACACGACTACATCTCCTTTTATGGCCTAAGGTCTTATGGTAGACTTAACGGGGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCTGTAGTTATAGAAGACAGGGAGTTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCTGGAAAGTTTTCCTTGACCCTTCGATTGTCATTATGGTCTGAGCACTTGGGTCTCCCTACAGGAGAGGACAATCAAATAATGGACCCAGTTGTTGAATCTACTTACAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGGCATGCCTTCAGACAAAGTGTGCTTTTTTGGAAAGAAAAAATTGGTCACACGACCATTGATTTAGGAATAGCCCCAGAAAAATTGGAATCCTATCATGATGGAGGAATTAAGAACACCGAACCCTTGGAGAGATTAGCATCAGTAAAGGGTCACCTAGTCTCTTTTCCCTTGGAGTTTATGTGTCAGGAAAGTCTGAGACCTGCTTTTAATGAAAGCGAATACTATGCTACTCAAGTTTTCCATTGA 2970 0.4249 MEQDDDDGDDETIPLHTDETHESAKDRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSPEVCRFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDEDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEVKERNPLRHSFKVACGIRSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDREKFPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRSKAPYEEAIPLLMPQHHMVIPHYLGRSREIQIESGNIDNPRVLKREDSFSSSSQDQDIPLLLPQESDGLDAHEEDQKLNGVVSSSHYLDKPRKISSGLPFSFRKAKVVALGSDTPMKGFVDDLDSEHDREKMPLDRVAHSDLQNTDPEWWETQERGDQEGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEDNQIMDPVVESTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRHAFRQSVLFWKEKIGHTTIDLGIAPEKLESYHDGGIKNTEPLERLASVKGHLVSFPLEFMCQESLRPAFNESEYYATQVFH* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04157 989 Pfam PLD-like domain 660 833 IPR025202 -
Phac9g04157 989 MobiDBLite consensus disorder prediction 497 519 - -
Phac9g04157 989 SUPERFAMILY Phospholipase D/nuclease 202 474 - -
Phac9g04157 989 PIRSF PLD_euk 4 491 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04157 989 PIRSF PLD_euk 484 989 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04157 989 SUPERFAMILY PH domain-like 125 217 - -
Phac9g04157 989 SUPERFAMILY Phospholipase D/nuclease 626 836 - -
Phac9g04157 989 CDD PH_PLD 70 217 - -
Phac9g04157 989 Gene3D Endonuclease Chain A 610 846 - -
Phac9g04157 989 PANTHER PHOSPHOLIPASE D 52 979 IPR015679 -
Phac9g04157 989 MobiDBLite consensus disorder prediction 14 28 - -
Phac9g04157 989 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 381 IPR001736 GO:0003824
Phac9g04157 989 SMART pld_4 354 381 IPR001736 GO:0003824
Phac9g04157 989 SMART pld_4 786 813 IPR001736 GO:0003824
Phac9g04157 989 CDD PLDc_vPLD1_2_yPLD_like_1 247 391 - -
Phac9g04157 989 Gene3D - 122 219 IPR011993 -
Phac9g04157 989 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 786 813 IPR001736 GO:0003824
Phac9g04157 989 CDD PLDc_vPLD1_2_yPLD_like_2 647 830 - -
Phac9g04157 989 Pfam Phospholipase D Active site motif 354 381 IPR001736 GO:0003824
Phac9g04157 989 Gene3D Endonuclease Chain A 241 476 - -
Phac9g04157 989 MobiDBLite consensus disorder prediction 1 30 - -
Phac9g04157 989 FunFam Phospholipase 621 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04157 Phac-Chr9 39354211 39364703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04157 7 865 Phospholipase D Gene Family (Wang group) AT3G16785 73.666 0.0 1226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04157 K01115 - gmx:100780514 1907.11