Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04154 ATGGCCACGGAACAGTTGATGTCCAGTGGCGGCCCTCGCTATGTGCAGATGAAATCGTCGCCACCGCCGTCTCCGCCGGCTGCGGCTGCCGAGGAGATGTCATCGGTTCCGTCGTTCCGGCACAGCGGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATCGTCTCCGTGTCTCGCCCCGACGCCAGCGATATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAGACAGTTCAAGTGGGAGCTAATGAAGAAAGCTCATCAAGTATTTATTTTGCATTTCGCCTTAAAGAAACGTGCCTTCATTGAGGAAATCCATGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACAATGCTATGGAGCAAGATGACGATGACGGTGATGACGAAACAATCCCCTTGCATACTGATGAAACTCATGAAAGTGCTAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATTCGACCAGCCTTGGGAAGACAGCAGTCTATTGCAGAGAGGGCAAAGAGAGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCCTGAGGTTTGCAGGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGCCCTAAGCTAAAGGAAGAATATGTGATGGTGAAACACCTGCCCAAAATCCAGAAGGATGAGGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGATCCTTTTGATACACAGCCTCTGGACATAATTGTTTTTGATGTACTGCCTGCATCGGATGGTAATGGGGATGGCCGTTTATCACTGGCAAGTGAAGTGAAAGAACGGAATCCATTACGTCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAGTAGAAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCCGGACTCAGACCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGAGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGATAACCATATTTGCTTTATCGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCGGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTAGACCGTGAAAAATTTCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCATGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAGCAAAGCTCCATATGAGGAAGCTATACCCTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTGAAAGTGGGAACATAGACAATCCAAGAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATGCTCATGAAGAAGACCAAAAATTGAATGGCGTAGTCTCCTCTTCACATTACCTGGACAAGCCAAGAAAGATCAGCAGTGGTCTTCCCTTTTCATTCCGCAAGGCCAAAGTTGTAGCACTTGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGATCGTGAGAAAATGCCTCTAGATAGAGTGGCTCATTCTGATTTGCAAAATACAGATCCAGAATGGTGGGAGACGCAAGAACGAGGTGACCAGGAAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGTCGTTGCCAAGTTATTAGGAGCGTGAGTCAATGGTCTGCTGGAACAAGTCAGACCGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCCGGGGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTGTATCGACGAATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGGGGGCAGAACTCTATCTTGCATAATCTTTATGAACTTCTTGGTCCTAAGATACACGACTACATCTCCTTTTATGGCCTAAGGTCTTATGGTAGACTTAACGGGGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCTGTAGTTATAGAAGACAGGGAGTTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCTGGAAAGTTTTCCTTGACCCTTCGATTGTCATTATGGTCTGAGCACTTGGGTCTCCCTACAGGAGAGGACAATCAAATAATGGACCCAGTTGTTGAATCTACTTACAAGGATATTTGGATGGCAACAGCAAAGGTAGTAAGAAAAATAGAATGTTAA 3084 0.439 MATEQLMSSGGPRYVQMKSSPPPSPPAAAAEEMSSVPSFRHSGAEANRIFEELPKASIVSVSRPDASDISPMQLSYTIQVQYRQFKWELMKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHNAMEQDDDDGDDETIPLHTDETHESAKDRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSPEVCRFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDEDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEVKERNPLRHSFKVACGIRSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDREKFPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRSKAPYEEAIPLLMPQHHMVIPHYLGRSREIQIESGNIDNPRVLKREDSFSSSSQDQDIPLLLPQESDGLDAHEEDQKLNGVVSSSHYLDKPRKISSGLPFSFRKAKVVALGSDTPMKGFVDDLDSEHDREKMPLDRVAHSDLQNTDPEWWETQERGDQEGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEDNQIMDPVVESTYKDIWMATAKVVRKIEC* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04154 1027 SMART pld_4 487 514 IPR001736 GO:0003824
Phac9g04154 1027 SMART pld_4 919 946 IPR001736 GO:0003824
Phac9g04154 1027 SUPERFAMILY PH domain-like 258 350 - -
Phac9g04154 1027 Coils Coil 105 125 - -
Phac9g04154 1027 MobiDBLite consensus disorder prediction 1 15 - -
Phac9g04154 1027 SUPERFAMILY Phospholipase D/nuclease 335 607 - -
Phac9g04154 1027 CDD PH_PLD 203 350 - -
Phac9g04154 1027 PIRSF PLD_euk 27 532 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04154 1027 PIRSF PLD_euk 527 623 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04154 1027 PIRSF PLD_euk 618 1025 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04154 1027 Pfam Phospholipase D Active site motif 487 514 IPR001736 GO:0003824
Phac9g04154 1027 SUPERFAMILY Phospholipase D/nuclease 759 969 - -
Phac9g04154 1027 FunFam Phospholipase 754 973 - -
Phac9g04154 1027 PANTHER PHOSPHOLIPASE D 166 1020 IPR015679 -
Phac9g04154 1027 CDD PLDc_vPLD1_2_yPLD_like_1 380 524 - -
Phac9g04154 1027 Gene3D - 255 352 IPR011993 -
Phac9g04154 1027 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 919 946 IPR001736 GO:0003824
Phac9g04154 1027 Pfam PLD-like domain 793 966 IPR025202 -
Phac9g04154 1027 CDD PLDc_vPLD1_2_yPLD_like_2 780 963 - -
Phac9g04154 1027 MobiDBLite consensus disorder prediction 1 38 - -
Phac9g04154 1027 MobiDBLite consensus disorder prediction 147 161 - -
Phac9g04154 1027 Gene3D Endonuclease Chain A 743 979 - -
Phac9g04154 1027 MobiDBLite consensus disorder prediction 134 162 - -
Phac9g04154 1027 Gene3D Endonuclease Chain A 374 609 - -
Phac9g04154 1027 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 487 514 IPR001736 GO:0003824
Phac9g04154 1027 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04154 Phac-Chr9 39353258 39364703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04154 1 998 Phospholipase D Gene Family (Wang group) AT3G16785 72.582 0.0 1391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04154 K01115 - gmx:100780514 1933.69