Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04153 ATGGAGCAAGATGACGATGACGGTGATGACGAAACAATCCCCTTGCATACTGATGAAACTCATGAAAGTGCTAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATTCGACCAGCCTTGGGAAGACAGCAGTCTATTGCAGAGAGGGCAAAGAGAGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCCTGAGGTTTGCAGGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGCCCTAAGCTAAAGGAAGAATATGTGATGGTGAAACACCTGCCCAAAATCCAGAAGGATGAGGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGATCCTTTTGATACACAGCCTCTGGACATAATTGTTTTTGATGTACTGCCTGCATCGGATGGTAATGGGGATGGCCGTTTATCACTGGCAAGTGAAGTGAAAGAACGGAATCCATTACGTCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAGTAGAAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCCGGACTCAGACCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGAGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGATAACCATATTTGCTTTATCGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCGGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTAGACCGTGAAAAATTTCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCATGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAGCAAAGCTCCATATGAGGAAGCTATACCCTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTGAAAGTGGGAACATAGACAATCCAAGAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATGCTCATGAAGAAGACCAAAAATTGAATGGCGTAGTCTCCTCTTCACATTACCTGGACAAGCCAAGAAAGATCAGCAGTGGTCTTCCCTTTTCATTCCGCAAGGCCAAAGTTGTAGCACTTGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGATCGTGAGAAAATGCCTCTAGATAGAGTGGCTCATTCTGATTTGCAAAATACAGATCCAGAATGGTGGGAGACGCAAGAACGAGGTGACCAGGAAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGTCGTTGCCAAGTTATTAGGAGCGTGAGTCAATGGTCTGCTGGAACAAGTCAGACCGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCCGGGGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTGTATCGACGAATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGGGGGCAGAACTCTATCTTGCATAATCTTTATGAACTTCTTGGTCCTAAGATACACGACTACATCTCCTTTTATGGCCTAAGGTCTTATGGTAGACTTAACGGGGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCTGTAGTTATAGAAGACAGGGAGTTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCTGGAAAGTTTTCCTTGACCCTTCGATTGTCATTATGGTCTGAGCACTTGGGTCTCCCTACAGGAGAGGACAATCAAATAATGGACCCAGTTGTTGAATCTACTTACAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGGTATGTTTGTAATAATTTTGCCCATTGTACATCTTTGGATGGAACTTCTCCTTTGTCTGTCCCTAACATTTATTTTAATCCAATTGTTTTTGCAGGCATGCCTTCAGACAAAGTGTGCTTTTTTGGAAAGAAAAAATTGGTCACACGACCATTGATTTAG 2883 0.4228 MEQDDDDGDDETIPLHTDETHESAKDRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSPEVCRFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDEDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEVKERNPLRHSFKVACGIRSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDREKFPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRSKAPYEEAIPLLMPQHHMVIPHYLGRSREIQIESGNIDNPRVLKREDSFSSSSQDQDIPLLLPQESDGLDAHEEDQKLNGVVSSSHYLDKPRKISSGLPFSFRKAKVVALGSDTPMKGFVDDLDSEHDREKMPLDRVAHSDLQNTDPEWWETQERGDQEGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEDNQIMDPVVESTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRYVCNNFAHCTSLDGTSPLSVPNIYFNPIVFAGMPSDKVCFFGKKKLVTRPLI* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04153 960 MobiDBLite consensus disorder prediction 497 519 - -
Phac9g04153 960 CDD PH_PLD 70 217 - -
Phac9g04153 960 MobiDBLite consensus disorder prediction 14 28 - -
Phac9g04153 960 Pfam PLD-like domain 660 833 IPR025202 -
Phac9g04153 960 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 354 381 IPR001736 GO:0003824
Phac9g04153 960 Pfam Phospholipase D Active site motif 354 381 IPR001736 GO:0003824
Phac9g04153 960 SUPERFAMILY PH domain-like 125 217 - -
Phac9g04153 960 PIRSF PLD_euk 491 925 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04153 960 PIRSF PLD_euk 4 491 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04153 960 Gene3D Endonuclease Chain A 241 476 - -
Phac9g04153 960 SUPERFAMILY Phospholipase D/nuclease 626 836 - -
Phac9g04153 960 SMART pld_4 354 381 IPR001736 GO:0003824
Phac9g04153 960 SMART pld_4 786 813 IPR001736 GO:0003824
Phac9g04153 960 Gene3D - 122 219 IPR011993 -
Phac9g04153 960 CDD PLDc_vPLD1_2_yPLD_like_1 247 391 - -
Phac9g04153 960 FunFam Phospholipase 621 840 - -
Phac9g04153 960 SUPERFAMILY Phospholipase D/nuclease 202 474 - -
Phac9g04153 960 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 786 813 IPR001736 GO:0003824
Phac9g04153 960 CDD PLDc_vPLD1_2_yPLD_like_2 647 830 - -
Phac9g04153 960 PANTHER PHOSPHOLIPASE D 52 895 IPR015679 -
Phac9g04153 960 MobiDBLite consensus disorder prediction 1 30 - -
Phac9g04153 960 Gene3D Endonuclease Chain A 610 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04153 Phac-Chr9 39353258 39364703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04153 7 865 Phospholipase D Gene Family (Wang group) AT3G16785 73.666 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04153 K01115 - gmx:100780514 1751.87