Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04149 ATGGCCACGGAACAGTTGATGTCCAGTGGCGGCCCTCGCTATGTGCAGATGAAATCGTCGCCACCGCCGTCTCCGCCGGCTGCGGCTGCCGAGGAGATGTCATCGGTTCCGTCGTTCCGGCACAGCGGCGCCGAGGCCAATCGGATTTTCGAGGAATTGCCGAAAGCCTCCATCGTCTCCGTGTCTCGCCCCGACGCCAGCGATATCAGCCCCATGCAACTCTCTTACACCATTCAGGTTCAGTACAGACAGTTCAAGTGGGAGCTAATGAAGAAAGCTCATCAAGTATTTATTTTGCATTTCGCCTTAAAGAAACGTGCCTTCATTGAGGAAATCCATGAGAAGCAGGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATTGGAGAACACAATGCTATGGAGCAAGATGACGATGACGGTGATGACGAAACAATCCCCTTGCATACTGATGAAACTCATGAAAGTGCTAAGGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATTCGACCAGCCTTGGGAAGACAGCAGTCTATTGCAGAGAGGGCAAAGAGAGCAATGCAAGGGTATCTGAATCACTTTTTGGGAAATATCAGTATTGTGAACTCTCCTGAGGTTTGCAGGTTTTTGGAGGTATCAAAGTTATCTTTTTCACCTGAATATGGCCCTAAGCTAAAGGAAGAATATGTGATGGTGAAACACCTGCCCAAAATCCAGAAGGATGAGGATTCCAGAAAGTGTTGTTTGTCTGACTGTTTCAGTTGCTGTAATGACAACTGGCAAAAGGTATGGGCTGTACTGAAACCTGGATTTTTGGCATTGCTGGCAGATCCTTTTGATACACAGCCTCTGGACATAATTGTTTTTGATGTACTGCCTGCATCGGATGGTAATGGGGATGGCCGTTTATCACTGGCAAGTGAAGTGAAAGAACGGAATCCATTACGTCATTCATTCAAGGTGGCTTGTGGAATCCGCAGTATCAGAATTAGAGTGAAAAGTAGAAGTAAAGTTAAAGATTGGGTTGCTGCAATTAATGATGCCGGACTCAGACCTCCTGAAGGCTGGTGTCATCCTCACCGTTATGGTTCATTTGCTCCTCCAAGAGGCTTAATTGAAGATGGAAGTCAAGCCCAGTGGTTTATTGATGGGCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGCTGCAAAATCAGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTTCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGGAAAAGCTAAGCAAGGAGTTCAGATTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGATAACCATATTTGCTTTATCGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTCTAATCTGGCCGGGAAAAGACTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTAGACCGTGAAAAATTTCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCATGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCAAAGAGGAGCAAAGCTCCATATGAGGAAGCTATACCCTTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCCGAGAGATACAGATTGAAAGTGGGAACATAGACAATCCAAGAGTTCTTAAAAGAGAAGATTCTTTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCCCAGGAGTCTGATGGGTTGGATGCTCATGAAGAAGACCAAAAATTGAATGGCGTAGTCTCCTCTTCACATTACCTGGACAAGCCAAGAAAGATCAGCAGTGGTCTTCCCTTTTCATTCCGCAAGGCCAAAGTTGTAGCACTTGGTTCAGATACACCAATGAAGGGCTTTGTAGATGATCTAGATTCTGAGCATGATCGTGAGAAAATGCCTCTAGATAGAGTGGCTCATTCTGATTTGCAAAATACAGATCCAGAATGGTGGGAGACGCAAGAACGAGGTGACCAGGAAGGTTTTCCTGAGGAATCAGGACAAGTTGGTCCTCTTGCTTCCTGTCGTTGCCAAGTTATTAGGAGCGTGAGTCAATGGTCTGCTGGAACAAGTCAGACCGAAGAGAGCATCCACAGTGCTTATTGTTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAGTTTTTTATCTCAGGTCTTTCCGGGGATGAGATGATACGGAATCGTGTGTTAGAAGCTTTGTATCGACGAATTATGCGAGCTTACAATGACAAAAAATCTTTCAGGGTTATAATTGTCATACCACTGCTGCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGGGGGCAGAACTCTATCTTGCATAATCTTTATGAACTTCTTGGTCCTAAGATACACGACTACATCTCCTTTTATGGCCTAAGGTCTTATGGTAGACTTAACGGGGGCCCTGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGATTGTATAACTTTGATTGGGTCTGCTAATATTAATGATAGGAGCTTACTTGGCTCCAGAGATTCTGAGATTGCTGTAGTTATAGAAGACAGGGAGTTGATTGGTTCTTATATGGATGGAAAGCCTTGGAAAGCTGGAAAGTTTTCCTTGACCCTTCGATTGTCATTATGGTCTGAGCACTTGGGTCTCCCTACAGGAGAGGACAATCAAATAATGGACCCAGTTGTTGAATCTACTTACAAGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATTTACCAGGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGGTATGTTTGTAATAATTTTGCCCATTGTACATCTTTGGATGGAACTTCTCCTTTGTCTGTCCCTAACATTTATTTTAATCCAATTGTTTTTGCAGGCATGCCTTCAGACAAAGTGTGCTTTTTTGGAAAGAAAAAATTGGTCACACGACCATTGATTTAG 3282 0.4351 MATEQLMSSGGPRYVQMKSSPPPSPPAAAAEEMSSVPSFRHSGAEANRIFEELPKASIVSVSRPDASDISPMQLSYTIQVQYRQFKWELMKKAHQVFILHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHNAMEQDDDDGDDETIPLHTDETHESAKDRDVPSSAALPIIRPALGRQQSIAERAKRAMQGYLNHFLGNISIVNSPEVCRFLEVSKLSFSPEYGPKLKEEYVMVKHLPKIQKDEDSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPASDGNGDGRLSLASEVKERNPLRHSFKVACGIRSIRIRVKSRSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAIASSIEAAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEGKAKQGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIIDNHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDREKFPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRSKAPYEEAIPLLMPQHHMVIPHYLGRSREIQIESGNIDNPRVLKREDSFSSSSQDQDIPLLLPQESDGLDAHEEDQKLNGVVSSSHYLDKPRKISSGLPFSFRKAKVVALGSDTPMKGFVDDLDSEHDREKMPLDRVAHSDLQNTDPEWWETQERGDQEGFPEESGQVGPLASCRCQVIRSVSQWSAGTSQTEESIHSAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYRRIMRAYNDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGPKIHDYISFYGLRSYGRLNGGPVATSQVYVHSKIMIVDDCITLIGSANINDRSLLGSRDSEIAVVIEDRELIGSYMDGKPWKAGKFSLTLRLSLWSEHLGLPTGEDNQIMDPVVESTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRYVCNNFAHCTSLDGTSPLSVPNIYFNPIVFAGMPSDKVCFFGKKKLVTRPLI* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04149 1093 SMART pld_4 487 514 IPR001736 GO:0003824
Phac9g04149 1093 SMART pld_4 919 946 IPR001736 GO:0003824
Phac9g04149 1093 Pfam Phospholipase D Active site motif 487 514 IPR001736 GO:0003824
Phac9g04149 1093 Coils Coil 105 125 - -
Phac9g04149 1093 MobiDBLite consensus disorder prediction 1 15 - -
Phac9g04149 1093 CDD PH_PLD 203 350 - -
Phac9g04149 1093 Pfam PLD-like domain 793 966 IPR025202 -
Phac9g04149 1093 Gene3D - 255 352 IPR011993 -
Phac9g04149 1093 PIRSF PLD_euk 28 624 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04149 1093 PIRSF PLD_euk 614 1058 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac9g04149 1093 SUPERFAMILY PH domain-like 258 350 - -
Phac9g04149 1093 PANTHER PHOSPHOLIPASE D 166 1028 IPR015679 -
Phac9g04149 1093 CDD PLDc_vPLD1_2_yPLD_like_1 380 524 - -
Phac9g04149 1093 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 919 946 IPR001736 GO:0003824
Phac9g04149 1093 SUPERFAMILY Phospholipase D/nuclease 335 607 - -
Phac9g04149 1093 CDD PLDc_vPLD1_2_yPLD_like_2 780 963 - -
Phac9g04149 1093 MobiDBLite consensus disorder prediction 1 38 - -
Phac9g04149 1093 SUPERFAMILY Phospholipase D/nuclease 759 969 - -
Phac9g04149 1093 Gene3D Endonuclease Chain A 374 609 - -
Phac9g04149 1093 MobiDBLite consensus disorder prediction 147 161 - -
Phac9g04149 1093 MobiDBLite consensus disorder prediction 134 162 - -
Phac9g04149 1093 FunFam Phospholipase 754 973 - -
Phac9g04149 1093 Gene3D Endonuclease Chain A 743 979 - -
Phac9g04149 1093 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 487 514 IPR001736 GO:0003824
Phac9g04149 1093 MobiDBLite consensus disorder prediction 630 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04149 Phac-Chr9 39353258 39364703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04149 1 998 Phospholipase D Gene Family (Wang group) AT3G16785 72.582 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04149 K01115 - gmx:100780514 1979.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04149 9 39353258 39364703 Phac9g04149 9 39353258 39364703 ECH