Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04148 ATGTGTGGAGGTGCAATTATTTCAGACTTCATTGGTGTCAAGCGTGGCCGCAACCTCGCCAAGAAGGAACTCTGGTCGGAGCTTGACCCTTTCTCTGACCTCCTCGGCTTCGACTACTCCTCCACCACCGCCGCCACCACCGCCGCCGCTACTTCCAAACTACCACTCCCCATAATCCCAGATAAAAAAGTGGAATCATGTGAGAAGAAGAAGAAAAGTGTGGGTGCAGCAGCAGGGAAGAAGAGTGAGCGTGCTCGCAAGAACGTGTACAGAGGAATCAGGCAAAGGCCATGGGGAAAATGGGCTGCAGAAATAAGGGACCCACACAAGGGTGTCCGCGTCTGGCTCGGCACCTTCTCCACCGCCGAGGAAGCCGCCAGAGCCTACGACACCGCCGCCAAACGCATCCGCGGCGACAAGGCCAAACTCAACTTCCCCGCCGCCACTCCGCCGCCCTCCAAGAAACGCTGCCTCAGCCCCGACCTCCCCCAACAAAGCAGCTCAGCCTCCACCGCACCACCGCCTTCCGCAGCCTCCTACGGCGGAGACAGCAGCGGAGGAGAGGAACTCGACCTGAAACAACTCGAACTGTTTCTCGGCTTAGAGAATGAGCAGCTTCTGCCCAACAATGGTGTCGAGTGGGACAACGGTTACATGATGGATGACTTGTGGATGCTCGACGACGTCGTTGTGACCAACCATGACCTAGTTTATTAG 717 0.5718 MCGGAIISDFIGVKRGRNLAKKELWSELDPFSDLLGFDYSSTTAATTAAATSKLPLPIIPDKKVESCEKKKKSVGAAAGKKSERARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFSTAEEAARAYDTAAKRIRGDKAKLNFPAATPPPSKKRCLSPDLPQQSSSASTAPPPSAASYGGDSSGGEELDLKQLELFLGLENEQLLPNNGVEWDNGYMMDDLWMLDDVVVTNHDLVY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04148 238 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Phac9g04148 238 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Phac9g04148 238 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Phac9g04148 238 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Phac9g04148 238 Gene3D AP2/ERF domain 89 148 IPR036955 GO:0003700|GO:0006355
Phac9g04148 238 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Phac9g04148 238 PANTHER DNA-BINDING DOMAIN 57 169 IPR044808 GO:0003700|GO:0009873
Phac9g04148 238 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Phac9g04148 238 MobiDBLite consensus disorder prediction 141 187 - -
Phac9g04148 238 MobiDBLite consensus disorder prediction 159 178 - -
Phac9g04148 238 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Phac9g04148 238 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04148 Phac-Chr9 39340936 39343575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04148 1 232 AP2-EREBP Transcription Factor Family AT3G16770 46.667 6.71e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac9g04148 AP2 4.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04148 K09286 - gmx:100817253 279.256