Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04137 ATGGGTGAAAATGTCAAAGCCAAAGACCAACAAAGAAGGTTCGCCATTCTTGGCGTCTCTTCAATCCTCCTTGTGGCTGTGGTGGCTGCAGTGGCTGTTACCTTAAACCAGGGAGAAGAAGCTGAAGAAGATGCAGGTCATATCACTAGTTCTCAAAGGACAAGTGTAGAGATACTCTGCCATTCAACAGAATACGCCAAAACATGCAAGAAAAGCCTTGCAAAAGTACCTGACAGAAATGCAGACACAAGAGCTTTGGTGAAAGCTGCGATCAATGCCACAGCAGTGGAACTTTTGAGTCACATGAAGAACTCTACCCTTTATCGTGACTTGGGGAAGGACAACATGACAAGACAAGCCGTGGAAATTTGCAAGGAAGTGTTCGAGTATGCGATTCATGGTATTCAGAAATCTGTTGACACAATAGACAAGTTTGAATATGGGAAGTTGAGTGAATATATCTATGATCTTAAGGTTTGGATCGCGGGGAGTCTCACTCACCAATACACATGCTTGTATGGTTTTGAGCACACAGCCACAAAAGCTGGTGCCACAATGAACAAGGTTTTGAACACCTCTTTGGAGCTTACCAGCAATGCGTTGGATATGATTGATGTGATCTCTGGTATACTGAAGGACCTTAACATGACCTCATTTGGGAATAGGAGGCTTCTCTCTCAGGACAGGGTGCCCTTAGATGATTACCCTTCATGGGTGAGTGAAGGGAAAAGGCGTCTTCTTGCGCAGGGCACAGAAGGTGCTAAGGTAGTTGTGGCCCAAGATGGGTCTGGCCAATTCAAAACCATCAAGGAAGCTCTTAAGACCGTTCCCCCAAACAATGCTGAACCTTTTGTGATTTACGTCAAAGCTGGTGTTTACAAGGAAAATGTGGAAATGTCCATGCTCATGACCCATGTCACAATCATTGGAGATGGTCCCACAAAGACTAGATTCAGTGGTAGTTTAAACTACGATGATGGCGTCCAAACTTACAAAACTGCTACTTTTGCGGTTAATGCTGCAAACTTCATGGCCAAGAATGTTGGATTTGAAAACACAGCAGGGTCTAAGAAACATCAAGCAGTGGCACTTCGAGTAACAGCAGACCAAGCTGTGTTTGTGAACTGCCACATGGACGGGTACCAAGACACCCTCTATGCTCAGTCCCAACGCCAATTCTACCGTGATTGTATAGTGACAGGCACAGTGGATTTTGTGTTTGGAGATGCAGTTGGAATGTTCCAAAAGTGCAAGCTAATTGTGAGAAAACCATTGAACAAACAAAAGTGCATGGTGACTGCTGGTGGGAGGGTGAAAGCTGACAGCCCCACTGCCCTTGTTTTCCAGGGTTGCCACTTCACAGGTGACCCTGAATTGCGTAGCTTGGAAGCCAAGGTAGCATACCTTGGAAGGCCTTGGAGGGCATTCTCTAAGGTCATCATCATGGAGTCTCAAATTGACAACATCTTCTTACCAGAAGGTTACATGGGATGGATGGGAATTAGTTTCATGGACACTTGTACTTATTATGAGTACAATAACAAGGGCCCTGATGCAGACACATCACTGAGAGTCAAATGGCCTGGTTTCAAGGTTCTAACTGCTCAAGAAGCTGCTGATTATTATCCTTCCAAGTTCTTTGAACTTGCTAATTCAGATGAACGTGATGATTGGATTGTTAGATCTAAGGTGCCTTACTCTCTTGGCGCTATGAATTCCTAG 1722 0.4477 MGENVKAKDQQRRFAILGVSSILLVAVVAAVAVTLNQGEEAEEDAGHITSSQRTSVEILCHSTEYAKTCKKSLAKVPDRNADTRALVKAAINATAVELLSHMKNSTLYRDLGKDNMTRQAVEICKEVFEYAIHGIQKSVDTIDKFEYGKLSEYIYDLKVWIAGSLTHQYTCLYGFEHTATKAGATMNKVLNTSLELTSNALDMIDVISGILKDLNMTSFGNRRLLSQDRVPLDDYPSWVSEGKRRLLAQGTEGAKVVVAQDGSGQFKTIKEALKTVPPNNAEPFVIYVKAGVYKENVEMSMLMTHVTIIGDGPTKTRFSGSLNYDDGVQTYKTATFAVNAANFMAKNVGFENTAGSKKHQAVALRVTADQAVFVNCHMDGYQDTLYAQSQRQFYRDCIVTGTVDFVFGDAVGMFQKCKLIVRKPLNKQKCMVTAGGRVKADSPTALVFQGCHFTGDPELRSLEAKVAYLGRPWRAFSKVIIMESQIDNIFLPEGYMGWMGISFMDTCTYYEYNNKGPDADTSLRVKWPGFKVLTAQEAADYYPSKFFELANSDERDDWIVRSKVPYSLGAMNS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04137 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 209 IPR035513 -
Phac9g04137 573 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Phac9g04137 573 CDD PMEI-like_3 59 209 - -
Phac9g04137 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 208 IPR035513 -
Phac9g04137 573 SMART PMEI_2 51 203 IPR006501 GO:0004857
Phac9g04137 573 Pfam Pectinesterase 256 547 IPR000070 GO:0030599|GO:0042545
Phac9g04137 573 Pfam Plant invertase/pectin methylesterase inhibitor 56 203 IPR006501 GO:0004857
Phac9g04137 573 PANTHER PECTINESTERASE 23 559 - -
Phac9g04137 573 FunFam Pectinesterase 52 208 - -
Phac9g04137 573 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Phac9g04137 573 NCBIfam pectinesterase inhibitor domain 49 206 IPR006501 GO:0004857
Phac9g04137 573 SUPERFAMILY Pectin lyase-like 253 547 IPR011050 -
Phac9g04137 573 FunFam Pectinesterase 4 252 570 - -
Phac9g04137 573 Gene3D - 253 572 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04137 Phac-Chr9 39266646 39269858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04137 5 566 Carbohydrate Esterase AT5G49180 44.251 2.44e-169 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04137 K01051 - gmx:100784682 793.497