Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04103 ATGTCACCACACCTTCAAACTTTGTTACCACTTCATCTGAACATGTCTTCTTCCTTTCCACCTTCCTGGCTCACTTCCCCTTCCTGCTCCACTTTGGACATAGATTCATCTTCCCCTACTGCGTTTCTCACAGTTCAGTGGTTAAGGTTTCTTCTTCTATCACCATGCCCTCAACGACTCATTCTCTCTACTCTTGACTTCATCTTCTTGCTCATTCTCTCAGCCTTTGCAGCTGTTAAACTATATTCTAGATTCTCTTCCCCACATACCTCTTCTTCCTCTTCCATCACCAAACCCCTTTTGCATGAGAAACACTTTGACCATAAAGTCACCTTCTTGTTCAAACTAACCTTCTTGGTCACCACCCTTTTGCTCGCAGCTTACACTGTTCTTGGCGTCTTGGCCTTCACTCAAACAAGTCTTTCTTCATGGACAGTCATAGAGGCGCTCTTTCGGCTCTTCCAAGCTGTGGCCAACATGGTGGTTGTGATCCTATTGGTTCACGAGCACAAGTTCAAAGCTTCAGAACACCCTTTCTCGCTGAGAATGTATTGGATTGGAAACATGGTGGTTTCGTGCTTTTTTGCCATTTCAGGTATTGTTCGCTTTGTAAGTGTGGATGGAGCGAGGTTGGAGCCTAGTTTGAGAGTGGATGATGTGTTTTCTTTGGTTAATCTCCCACTTTCTGCGTTCCTTTTCGTGGTAGGAATGAAGGGACTAACGGGGATTCAGGTGATTGGAGTTTCTGATGATGTGACAACATATCAGTCCCTTTCCAATGACAGAAACTCGAGTCCTTATGCTCATTCCTCTGTTTTTTCCAAAATACTCTGGCTTTGGATGAACCCTGTGCTGAACAAAGGCTACCAAACACCCCTCAAACTCGATGATGTGCCTTCTCTTCCTCTGGAGTTTCGTGCAGAAAAAATGTCAGAGCTTTTTCAGAGCAATTGGCCGAAGGAAGAGGATAACTGCAAGCACCCGGTTGGAGTCACCTTGTTCAGATGCTTCTGGAGGCACATAGCTTTCACTGGCTTCCTTGCAGTCATAAGACTTGCGGTTATGTACGTTGGTCCAATGCTTATTCAGAGCTTTGTTGACTTCACCTCAAGGAAAGACAGCACCCCTCTTGAAGGACTCATTCTGATTCTGATCCTGTTTGTTTCAAAATCAGTTGAGGTCCTCTCTGTGCACCAATTCAACTTCAACTCTCAGAAACTAGGCATGTTAATGCGTTCCAGCATCATCACTTCAGTGTACAAGAAGGGTTTGAGGCTTTCAAGTTCCTCAAGGCAGGCTCATGGCACTGGGCAGATTGTGAACCACATGGCTGTTGATGCACAACAGCTCTCAGATTTGATGATGCAGTTTCACCCCATTTGGCTGATGCCACTGCAAGTAGCTGCAGCTTTGGCACTCATCTACAACAGCATTGGCTTATCAGCACTTGCAGCACTGCTTGGAACCAGCTTGGTGTTTATTTTCACTCTCATTCGCACCAAGAAGAGCAACAGCTTCCAGTTCAGGATAATGAAGAGCCGTGACTTGAGGATGAAGGCCACCAATGAGTTGCTTAACAACATGCGTGTGATCAAGTTCCAAGCCTGGGAGGAGTACTTTGGCAACAAGATTCAGCAGTTTAGAGAGGCTGAACATGGTTGGATTGGAAAGTTCTTGTACTACTTTGCCATCAACATGGGGGTTCTGAGCACTGCTCCTTTGTTGGTGTGTGTTCTCACATTTGGAGCTGCCATTCTTCAGGGTGTTCCTTTGAATGCTGGCACTGTGTTCACAATCACTTCAGTGATCAAGATTTTGCAAGAGCCTGTGAGGACCTTCCCTCAGGCTCTCATCTTGATTTCCCAAGCGCTGATATCTCTTGGGAGGTTGGATGAGTTCATGATGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGATTGGAGGGATGTGATGGTGATACTGCTGTGGAGATCAAGAATGGGGAATTCTCCTGGGATGATTCAGATGCCAATGTGGCTCTGAAAGTTGAAGACATGGAAATCAAGAGAGGGGACCATGCTGCTGTTGTGGGAACAGTTGGGTCAGGCAAGTCTTCTTTGCTGGCTTCTTTGTTAGGTGAAATGATCAAGATATCAGGAAAGGTCAGAGTTTGTGGGTCAGTAGCCTATGTAGCACAGACATCATGGATTCAGAATGCAACAATCCAAGAGAACATAGTGTTTGGTTTACCAATGAACAGAGGGAAGTACGAGGAAGCTATAAGAGTGTGTTGCCTAGAAAAGGATCTTGAAATGATGGAATATGGAGACCAAACTGAGATTGGAGAAAGGGGTATTAACCTCAGTGGTGGCCAGAAGCAACGTGTACAACTTGCTAGAGCTGTATACCAAGACTCTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACTGGGTCCTTTATTTTCAAGGAATGTATCATGGGAGCTCTTAAAAACAAGACCATTTTACTTGTAACCCACCAAGTTGACTTCTTGCATAATGTTGACTGTATAATGGTGATGAGAGAAGGGAGAATCGTGCAAAGTGGGAAGTATGATGAACTTCTGAATGCAGGCCTGGATTTTGGTGCACTTGTGGCGGCTCATGAATCCTCCATGGAGATTGCAGAGTCTAGTGATAAAGGTGGTGATGATTCGATTCAGTCTCCAAAACTGGCTCGAATCCCCTCAAAAGAAAAGGAAAAGGAAGGTGAAAAGCAACCTCAAGATCAAGCTAAGTCAGCTAACACCACAGCAAAGCTCATTGAAGATGAGGAAAGAGAAACTGGGCGTGTGAACCTGAAAGTGTATGAACACTACTTCACTGAAGCATTTGGGTGGTGGGGTATTGTTCTGATGCTGGCAATGTCTCTAACATGGATTTTGTCTTTCTTGGCTGGTGACTACTGGCTAGCAATTGGAACTGCAGAAGGCACTAGCTTTGCTCCTTCTACATTCATCACTGTCTATGCTTGCATAGCAGTTGGTGTAACTTTTGTTGTGATGGCAAGATCACTCTTATTTACCTATTGGGGTCTCAAGACATCTCAAAGCTTCTTCAGTGGAATGCTTCAAAGCATCTTGCATGCACCAATGTCATTCTTTGACACCACTCCCTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGATTGACATATCAATTCCAATGTTAGTAAACTTCGTAATGGTGGCATACTTCTCAGTGTTCAGCATCCTCATTGTAACATGCCAAAATGCTTGGGAAACGGTCTTCCTCTTGATCCCACTGTTCTATCTTAATAACTGGTATAGGAAATATTACCTTGCATCTTCTCGGGAATTGACTCGCCTTGATTCTATCACCAAAGCTCCTGTTATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACCATTCGTGGCTTCAGAAAACAGAACTTATTTTGTCAAGAAAATATTGACAAAGTGAATGCTAGTCTGAGAATGGATTTCCACAACAATGGTGCCAATGAATGGCTTGGTTTTCGCTTGGACTACATGGGTGTGGTTTTCCTTTGCATTGCCACTGTTTTTATGATCTTTCTCCCAAGTGCTATCATTAGGCCAGAATATGTTGGTCTGTCTTTGTCCTATGGTTTGGCTCTGAGTAGTCTTTTGGCATTTACTATAACAATGACTTGCTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGAATAAAGCAGTTCACCAATCTTCCCTCAGAAGCACCATGGAAAATGGCTGATAGCTCTCCTCCTAAGAATTGGCCCAGCCATGGCCACATTGAGTTAAACAATTTGCAGGTTCGGTATCGGCCAAATACTCCTCTGGTTCTGAAAGGAGTCTCCCTCACCATTGAAGGAGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGGAAATCAACCCTCATTCAGGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGGAAAATAATTGTTGATGGGATCAACATTTGCACTGTGGGCCTTCATGATCTGAGGTCTCGATTTGGAATTATCCCTCAAGATCCTGTTCTCTTTCAAGGAACAGTACGAAGCAACATTGATCCCCTTGGACTGTACTCAGAAGAAGAAATCTGGAAGAGCCTAGAACGTTGCCAACTGAAAGAAGTGGTGGCTGCAAAACCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTATGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTGTTCATGGATGAAGCAACAGCATCTGTTGATTCACAAACTGATGCTGTGATACAGAAAATCATCCGTGAGGATTTTGCAGATCGTACAATTATCAGCATTGCTCACAGAATACCTACAGTCATGGACTGTGACAAAGTTTTAGTCATTGATGCAGGGCTTTCAAAAGAATATGACAAGCCATCACGTTTGCTAGAAAGGCCTTCACTTTTTGGAGCATTGGTAAAGGAGTACTCCAATAGATCTGCACAAATATAG 4557 0.4402 MSPHLQTLLPLHLNMSSSFPPSWLTSPSCSTLDIDSSSPTAFLTVQWLRFLLLSPCPQRLILSTLDFIFLLILSAFAAVKLYSRFSSPHTSSSSSITKPLLHEKHFDHKVTFLFKLTFLVTTLLLAAYTVLGVLAFTQTSLSSWTVIEALFRLFQAVANMVVVILLVHEHKFKASEHPFSLRMYWIGNMVVSCFFAISGIVRFVSVDGARLEPSLRVDDVFSLVNLPLSAFLFVVGMKGLTGIQVIGVSDDVTTYQSLSNDRNSSPYAHSSVFSKILWLWMNPVLNKGYQTPLKLDDVPSLPLEFRAEKMSELFQSNWPKEEDNCKHPVGVTLFRCFWRHIAFTGFLAVIRLAVMYVGPMLIQSFVDFTSRKDSTPLEGLILILILFVSKSVEVLSVHQFNFNSQKLGMLMRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALALIYNSIGLSALAALLGTSLVFIFTLIRTKKSNSFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFLYYFAINMGVLSTAPLLVCVLTFGAAILQGVPLNAGTVFTITSVIKILQEPVRTFPQALILISQALISLGRLDEFMMSKEMDEGAVERLEGCDGDTAVEIKNGEFSWDDSDANVALKVEDMEIKRGDHAAVVGTVGSGKSSLLASLLGEMIKISGKVRVCGSVAYVAQTSWIQNATIQENIVFGLPMNRGKYEEAIRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRVQLARAVYQDSDIYLLDDVFSAVDAQTGSFIFKECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGRIVQSGKYDELLNAGLDFGALVAAHESSMEIAESSDKGGDDSIQSPKLARIPSKEKEKEGEKQPQDQAKSANTTAKLIEDEERETGRVNLKVYEHYFTEAFGWWGIVLMLAMSLTWILSFLAGDYWLAIGTAEGTSFAPSTFITVYACIAVGVTFVVMARSLLFTYWGLKTSQSFFSGMLQSILHAPMSFFDTTPSGRILSRVSTDILWIDISIPMLVNFVMVAYFSVFSILIVTCQNAWETVFLLIPLFYLNNWYRKYYLASSRELTRLDSITKAPVIHHFSETIAGVMTIRGFRKQNLFCQENIDKVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATVFMIFLPSAIIRPEYVGLSLSYGLALSSLLAFTITMTCSVENKMVSVERIKQFTNLPSEAPWKMADSSPPKNWPSHGHIELNNLQVRYRPNTPLVLKGVSLTIEGGEKIGVVGRTGSGKSTLIQVLFRLIEPSAGKIIVDGINICTVGLHDLRSRFGIIPQDPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKEVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDKVLVIDAGLSKEYDKPSRLLERPSLFGALVKEYSNRSAQI* 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04103 1518 CDD ABC_6TM_ABCC_D2 957 1251 IPR044726 GO:0140359
Phac9g04103 1518 FunFam ABC transporter C family member 3 1259 1510 - -
Phac9g04103 1518 Pfam ABC transporter 678 807 IPR003439 GO:0005524
Phac9g04103 1518 FunFam ABC transporter C family member 10 326 638 - -
Phac9g04103 1518 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 268 1513 - -
Phac9g04103 1518 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 342 622 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g04103 1518 SMART AAA_5 1302 1487 IPR003593 GO:0016887
Phac9g04103 1518 SMART AAA_5 683 856 IPR003593 GO:0016887
Phac9g04103 1518 Pfam ABC transporter transmembrane region 343 610 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g04103 1518 Pfam ABC transporter transmembrane region 977 1203 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g04103 1518 Pfam ABC transporter 1293 1441 IPR003439 GO:0005524
Phac9g04103 1518 Gene3D - 1259 1508 IPR027417 -
Phac9g04103 1518 CDD ABCC_MRP_domain1 656 856 - -
Phac9g04103 1518 MobiDBLite consensus disorder prediction 905 920 - -
Phac9g04103 1518 ProSitePatterns ABC transporters family signature. 781 795 IPR017871 GO:0005524|GO:0016887
Phac9g04103 1518 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 656 879 IPR003439 GO:0005524
Phac9g04103 1518 FunFam ABC transporter C family member 4 639 897 - -
Phac9g04103 1518 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1276 1510 IPR003439 GO:0005524
Phac9g04103 1518 CDD ABCC_MRP_domain2 1274 1494 - -
Phac9g04103 1518 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 958 1239 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g04103 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1266 1509 IPR027417 -
Phac9g04103 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 653 875 IPR027417 -
Phac9g04103 1518 FunFam ABC transporter C family member 5 924 1257 - -
Phac9g04103 1518 SUPERFAMILY ABC transporter transmembrane region 333 630 IPR036640 GO:0005524|GO:0016020
Phac9g04103 1518 MobiDBLite consensus disorder prediction 888 933 - -
Phac9g04103 1518 Gene3D - 635 898 IPR027417 -
Phac9g04103 1518 CDD ABC_6TM_ABCC_D1 343 630 IPR044746 GO:0140359
Phac9g04103 1518 SUPERFAMILY ABC transporter transmembrane region 958 1256 IPR036640 GO:0005524|GO:0016020
Phac9g04103 1518 Gene3D ABC transporter type 1, transmembrane domain 331 634 IPR036640 GO:0005524|GO:0016020
Phac9g04103 1518 Gene3D ABC transporter type 1, transmembrane domain 924 1257 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04103 Phac-Chr9 39072401 39081455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04103 656 905 Calmodulin-binding Proteins AT2G36910 29.670 1.14e-25 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04103 - K05665 vra:106762025 2637.45