Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04083 ATGTTTCATTCCAAACGCTTCAAACCCCTTCTTCTATATCTCAACTCACTCACAACAACACCTCTTCAAACCCCAAAACCCAACAATCCTTTTCGCTCGATACTCTCTCTGAAACACACCTCAAATGCTTCACAGCAACACCCTTTCACGGTTTCCTACCTCGTAAACGATTGCGGCTTCTCCCCAGAAACCGCTCTCAAGGCCTCCAAATTCATTCAATTCGAAACCCCCGAAAAGCCCGACTCAGTCATCGCCTTCTTCAGAGACAACGGATTCAGCAGCACCCAGATAAACAGCATCGTTAGAAGAGCACCTAACGTGCTCACTTGCGACCCCCACAAAAGGGTTCTTCCAAAGTTCGAGTTTTTACTCTCCAAAGGGGCCTCGCGCTCTGACATTGTGGAACTGGTAAGTAGGAGCCCCAGAATCCTTTATTCGAGCCTCGAGAATAACATTGTCCCTTCCTATGAACTGATGAGGAAGTTTCTTCAAACTGACGAGAGAACCATGGATTGCATACGCTCTTGTGGGCATTTCTTTGGTACTGATCGTGTGGTGCACAATGTGAAACTTTTAGTTGATTATGGAGTCACTGATCCTGTATTAGCCTTTTTGTTACGCAGGAGAGTTTCTATAATCTTGTGTTCTGCCTTGAAGAGGACTTTGGATGAGGTTAAGGAAATGGGGTTTGACCCTTCCAAGTTGAGCTTTGCCATCGCGCTGCTGGCGAAAAAGACCATTCCGAAATTGCGATGGGAGAGGAAAGTTGAAGCCTTTAAGAGATGGGGTTGGTCTGAAGAATTGGTTCTTAGTGTGTTCAAGAGGCAGCCCCTCGTAATGTTGGTGTCCCAAGAGAAGATTGATAGGATTATGAGATTTTGGGTCAAGCAATCAGGTTGGGACTATTTGGCTCTTACCAAGAAGCCAGAGATTTTTGGATTTAGTTTGGAGAGAAGGATCATTCCAAGGGCACTTGTTGTGCAGTATTTACTCAGGAAAGGTTTGAGGAGAAAGAGTGCCAGCTTGATTACGCCATTTTCTGTTTCTGAAAAGGAGTTTATTGAAAAGTATGTCATGCGTTTTAAGGAGGAGACAAGTGAACTATTAAAGCTGTACCATATGAGTGTTCAAGGACTAAAAGAGGATGATCAAATGGTTAACTCATGA 1167 0.443 MFHSKRFKPLLLYLNSLTTTPLQTPKPNNPFRSILSLKHTSNASQQHPFTVSYLVNDCGFSPETALKASKFIQFETPEKPDSVIAFFRDNGFSSTQINSIVRRAPNVLTCDPHKRVLPKFEFLLSKGASRSDIVELVSRSPRILYSSLENNIVPSYELMRKFLQTDERTMDCIRSCGHFFGTDRVVHNVKLLVDYGVTDPVLAFLLRRRVSIILCSALKRTLDEVKEMGFDPSKLSFAIALLAKKTIPKLRWERKVEAFKRWGWSEELVLSVFKRQPLVMLVSQEKIDRIMRFWVKQSGWDYLALTKKPEIFGFSLERRIIPRALVVQYLLRKGLRRKSASLITPFSVSEKEFIEKYVMRFKEETSELLKLYHMSVQGLKEDDQMVNS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04083 388 PANTHER CGI-12 PROTEIN-RELATED 46 362 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 Pfam mTERF 85 287 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 Pfam mTERF 253 353 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 SMART mt_12 203 231 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Phac9g04083 388 Gene3D Transcription termination factor 3, mitochondrial 165 371 IPR038538 -
Phac9g04083 388 FunFam Mitochondrial transcription termination factor-like 148 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04083 Phac-Chr9 38978956 38981044 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac9g04083 mTERF 8.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04083 K15032 - gmx:102666739 559.296