Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04082 ATGTTTGCCTCACAAAGCTTCAAATCCCTTCTTCTCCATTCCAAGAGACTCACAACCCCCAAACCCTATTTTCCTTTTCCCTCCACACTTTCTCTCAAACACTTCTCCTTCACCTCAGAACAACACTCACTCACCGTTTCCTACCTCATAAACACCTTTGGCTTCTCACCACAAACCGCTCTCAAGGTTTCCGAGAACGTTAGCTTCGATACCCCTCAGAAGCCCGACTCAGTCATCGCTTTCTTCACCAAAAATGGATTCACCAATGCCCATATCAACACCATTGTCAAAAGGGTACCCAGCATACTCGTTTGCAACCCCGACAAGAGGCTCTCGCCAAAGTTCCAATTTTTACTCTCGAAGGGTGCTTCAGCTTCTGATATAGTTCGTCTTGTTCATAGGTGCCCCAGAATCCTCGGATCCAGCCTCAAGAACAACGTGATCCCCTCCTTCGAATTGGTGAGAAGGTTCCTCCAATCTGACCAGAAAACCATTGAGTGTGTTTTCGGTAATAGACCTTTCCTTCAGTACAACGTTGGAGTGCAGAATGTGAACATGTTGCTTGATGCTGGAGTACTTGACTCCAGCATCGGCTATTTGTTTGGAAGGAGGCCTTCTATACTCTTGTCTACTAACTTGAGGGAGGCAATTGATGAAGTTAAGGAAATGGGGTTCGACCCTTCCAAGATAACTTTCGCAATTGCTTTGCATGCCAAAAGGGTTGTGTCGAAATCGCGGTGGGACGCGAAAGTTGATGCCTTTAAGATGTGGGGTTGGTCGGAGGAAATGGTTCTTGATTCGTTCAGGAAGCATCCCCTCTTAATGTTGGCTTCCAAGGATAAAATCAACGAGGTCATCAGATTTTGGGTTGTTGAATTAGGTTGGGACCCTTTGGCGCTTGCCAAAATGCCGAAGATTTTTGGGTTCAGTTTGGAGAGAAGGATTGTTCCGAGGGGTTTGGTTCTGCGGCATTTGATCGTCAAGGGTTTGAGAGAGAAGAGTGCCAAGTTGTCTACCCCGTTTGATGTTTCTGAAGAGTTGTTTCTTAAAAATTATGTGATGCGGTTTAAGGAGGAAGTGTGTGAACTGTTAAAGCTTTATCAGGAAAAGATAAGTTTCCAAGAACACAGGGAGGATTGTGTAGAATCTGCCAGTTAG 1158 0.4542 MFASQSFKSLLLHSKRLTTPKPYFPFPSTLSLKHFSFTSEQHSLTVSYLINTFGFSPQTALKVSENVSFDTPQKPDSVIAFFTKNGFTNAHINTIVKRVPSILVCNPDKRLSPKFQFLLSKGASASDIVRLVHRCPRILGSSLKNNVIPSFELVRRFLQSDQKTIECVFGNRPFLQYNVGVQNVNMLLDAGVLDSSIGYLFGRRPSILLSTNLREAIDEVKEMGFDPSKITFAIALHAKRVVSKSRWDAKVDAFKMWGWSEEMVLDSFRKHPLLMLASKDKINEVIRFWVVELGWDPLALAKMPKIFGFSLERRIVPRGLVLRHLIVKGLREKSAKLSTPFDVSEELFLKNYVMRFKEEVCELLKLYQEKISFQEHREDCVESAS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04082 385 Gene3D Transcription termination factor 3, mitochondrial 42 181 IPR038538 -
Phac9g04082 385 Gene3D Transcription termination factor 3, mitochondrial 182 365 IPR038538 -
Phac9g04082 385 Pfam mTERF 182 348 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 Pfam mTERF 80 169 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 FunFam Mitochondrial transcription termination factor-like 143 360 - -
Phac9g04082 385 PANTHER CGI-12 PROTEIN-RELATED 40 357 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 SMART mt_12 198 226 IPR003690 GO:0003690|GO:0006355
Phac9g04082 385 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04082 Phac-Chr9 38975000 38976865 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac9g04082 mTERF 2.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04082 K15032 - gmx:100792944 452.595