Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04081 ATGTTGAATAAACTCCTCTGCTTGAAATGTGTCACTTCCACAGCAACATCATGTTACCCTTTTATCCAACACTACCCATTGCCCTTGCCCTTTTCTCTGCGTTTCTTCACAACCACTTCAAATTCACGCTCATTTGCGGTATCCTACCTCACTGACAAATTTGGGTTCTCCCCTGATTCTGCTTCCAAAATCTCTAACTCCTACAATATTTGTTTCCAGACCCCAGAAAAGCCCGAGTCAGTGATCATGTTCTTCAGAAGTCGTGGTTTCTCTAATCCCCAAATTAACCAAATGGTTAGAAAGGTACCATGGTTGCTTTCCTGTGACCCCTGCAAAAGGTTATTGCCAAAGTTTGAATTTTTACTCTCAAAGGGTGTTTCTAGCTCTGAAATTGTTGACCAAGTGAGTAAGAACCCTGGAATACTGGGTCCAAGCCTGAATAATCATATAATTCCAACCTATGAATTGATATATAAATTCTTGCAATCTGATGCAAAGACTGTTGGTTGCATTTTTGGTAATTCATTTTTCTCATACGGGGATCGTCTAGCACGCAACATCAGATTGCTGCAAGAGAATGGAGTGAGAGAATCAAACATTGCAAGATTGCTTGGGAACCGTAGTAAAGAGGTGTTTATCTCAAATGATATGGTTGAGTTGGTGAAGGAAGTTAAGGATTTGGGGTTTGATCCGTCAAAAACAACTTTTGTTGTAGCCATGATGGCCATGAAAAGAACGAGTCCTTCCATGTGGAAGGAGAAAGTTGATACCTTCAAGAAATGGGGTTGGTCTGATGAAGCCTTTTCTGAAGCATTTAGGAGGCACCCTCACTGTATGTTGACCTCCATTGAAAAAATAAATGTTGTTATGAACCTTTGGGTCAATCAGTTGGGTTGGGATGCTTTGGACCTTGTTCGAGGTCCTAAGATTTTCGGGTTGAGTATGGAGAAGACACTTGTTCCAAGGGCTCGTGTTGTTCAGCATTTACTTGCTAAGGGCTTGAGGAACAACAGTACCAGCTTTCTTACCCCGTTTTGGGTTTCTGAAAAGGTGTTTCTTGAGAAGTTTGTGACATGTTTTAAGGAGGAATCACGTCAACTATTAAAGCTGTACCAGGAAAAAGTCAGTGTTCAAGGAAAAGAGGAGGTTGATGCAGCATGGTGCAGTTCTCAAATGGTTAACTCATGA 1188 0.4133 MLNKLLCLKCVTSTATSCYPFIQHYPLPLPFSLRFFTTTSNSRSFAVSYLTDKFGFSPDSASKISNSYNICFQTPEKPESVIMFFRSRGFSNPQINQMVRKVPWLLSCDPCKRLLPKFEFLLSKGVSSSEIVDQVSKNPGILGPSLNNHIIPTYELIYKFLQSDAKTVGCIFGNSFFSYGDRLARNIRLLQENGVRESNIARLLGNRSKEVFISNDMVELVKEVKDLGFDPSKTTFVVAMMAMKRTSPSMWKEKVDTFKKWGWSDEAFSEAFRRHPHCMLTSIEKINVVMNLWVNQLGWDALDLVRGPKIFGLSMEKTLVPRARVVQHLLAKGLRNNSTSFLTPFWVSEKVFLEKFVTCFKEESRQLLKLYQEKVSVQGKEEVDAAWCSSQMVNS* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04081 395 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 SMART mt_12 234 264 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 Gene3D Transcription termination factor 3, mitochondrial 53 173 IPR038538 -
Phac9g04081 395 Gene3D Transcription termination factor 3, mitochondrial 174 370 IPR038538 -
Phac9g04081 395 FunFam Mitochondrial transcription termination factor-like 146 364 - -
Phac9g04081 395 PANTHER CGI-12 PROTEIN-RELATED 42 362 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 Pfam mTERF 83 240 IPR003690 GO:0003690|GO:0006355
Phac9g04081 395 Pfam mTERF 247 352 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04081 Phac-Chr9 38967539 38969286 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac9g04081 mTERF 8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04081 K15032 - gmx:102663414 520.39