Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04080 ATGGAAGATAGCTATGGAGGCAGTTCCTCCAAGGACAACAACTGCAGCATCAAGGAACAAGACCGGTTGCTGCCAATAGCCAATGTTGGTCGGCTCATGAAGCAGATTTTGCCACAGAATGCAAAAATCTCCAAGGAAGCAAAAGAGACAATGCAAGAATGTGTGTCGGAGTTCATAAGCTTTGTGACAAGTGAAGCTTCGGAGAAGTGCAGAAAGGAGAGGAGAAAGACAGTGAATGGTGATGACATTTGCTGGGCATTGTCTACACTGGGATTTGATGACTATGCTGCACCAATGAGAAGGAAATCAAGGACGAAAATTCAGGAAGCATGA 333 0.4505 MEDSYGGSSSKDNNCSIKEQDRLLPIANVGRLMKQILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALSTLGFDDYAAPMRRKSRTKIQEA* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04080 110 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 9 100 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac9g04080 110 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Phac9g04080 110 ProSitePatterns NF-YB/HAP3 subunit signature. 54 70 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac9g04080 110 Gene3D Histone, subunit A 12 110 IPR009072 GO:0046982
Phac9g04080 110 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Phac9g04080 110 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Phac9g04080 110 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Phac9g04080 110 SUPERFAMILY Histone-fold 20 101 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04080 Phac-Chr9 38956186 38957734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04080 17 101 CCAAT-HAP3 Transcription Factor Family AT2G47810 81.176 2.92e-51 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac9g04080 CBFD_NFYB_HMF 1.8e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04080 K08065 - gmx:102663543 204.142