Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04068 ATGGATTCTTCAAGGGATGCGGGTGTTGTAGCAGGGACAGTGCTAATTCCCATGCGTTTTGTGTGGCCATATGGAGGAAGGAGTGTGTTTCTCTGCGGTTCTTTCACACGGTGGTCTGAGCTTCTACCGATGTCGCCAGTGGAAGGTTGTCCAACTGTGTTTCAAGTTATTTATAATTTGCCACCCGGTTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGGCATGATGAACATCAACCTTACGTACCAGGAGAATATGGGATGGTCAACACTGCCTTCTTGCCAACTGATTCCAACTACATGCCTGTTTTGAATCCAGATGCACCTGGAAATAGCATGGATGTGGATAATGAGGCTTTTCGCCGATTGGTCCGGGTGACTGATGGTACATTCAGTGAGGGGCTGCCAAGAATATCAGATGCTGATGTACAACTATCCCGTCAGCGTATTTCTGCATTTCTGTCTTCCCACACTGCTTATGAATTACTTCCCGAGTCAGGCAAGGTTGTTGCTTTGGATGTTGATCTACCAGTGAAGCAGGCATTTCATATACTGCATGAGCAGTTTTCTGATCTGGATAACTTACAGGGAATTTTCATGGCTCCTCTTTGGGACTTGTGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTATTTTAATTTTAAGAGAGGTATTTCTTTTATATTTTATTTTAATTTAA 714 0.4328 MDSSRDAGVVAGTVLIPMRFVWPYGGRSVFLCGSFTRWSELLPMSPVEGCPTVFQVIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGEYGMVNTAFLPTDSNYMPVLNPDAPGNSMDVDNEAFRRLVRVTDGTFSEGLPRISDADVQLSRQRISAFLSSHTAYELLPESGKVVALDVDLPVKQAFHILHEQFSDLDNLQGIFMAPLWDLCKGQFVGVLSALDFILILREVFLLYFILI* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04068 237 PANTHER 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT 15 96 - -
Phac9g04068 237 FunFam Sucrose nonfermenting 4-like protein 13 98 - -
Phac9g04068 237 Gene3D Immunoglobulins 16 107 IPR013783 -
Phac9g04068 237 SUPERFAMILY E set domains 16 95 IPR014756 -
Phac9g04068 237 CDD E_set_AMPKbeta_like_N 17 92 - -
Phac9g04068 237 Pfam Glycogen recognition site of AMP-activated protein kinase 16 93 IPR032640 -
Phac9g04068 237 Gene3D - 138 232 IPR046342 -
Phac9g04068 237 SUPERFAMILY CBS-domain pair 151 233 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04068 Phac-Chr9 38903488 38906335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04068 6 123 Protein tyrosine phosphatase (PTP) family AT3G01510 28.906 2.69e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04068 - - gmx:100785692 404.445