Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g04052 | ATGGCCCCGTCCGAGGTTGATGTTGTTTCTTCCTCGTCCTTCGGTTGCGTTCTGAGGGACCGCAACAACCGCGAAGCATGCAGGGAAAGCAACGTGAAGGGCACGCATAATGATCATGCTACGTTACAAAGAAACATCAAGAACTTTGTCATGGACCTTAACACGTGCATGGGGGTGTCCTCTGTTTCCACAACAAACGAAAATGAAAACAACAACAACACCACCACCACCACTACCAGCAGCAGCAGCAAGAACAAAGGCGTTAACCAGCGTAAGGCTCCAAAAAATAACCGCCTAGAGAGACTTCGTTTCACACGAGCAAACTCCTTCAACAACGGCGGCAGCAGCAGCACCAACAACAAAGAGTCTTCCTTGGCCTTGTTGATCAGCCCGAGACACTCACGGCTTCTCGATCGATGGGCAGCTAGACAGGCTCGGGAGATGGTGTCGAATTTGGCGAATGAGGTTGAGTTGTTGTCAATGGATGAAGGTGACATGTTCCCAAGGACACCCAGTTCGTCTGAGGAAGAATCCACCTCCTCGGAGATCCCTAACATGGCTGCCTCTTCCCTTGTTCAGATATGGGAGAAGAGGCTGAAGCAATCTGTTGTCTCCAAAACGAACACATTGTCAGAGAAGATTGGTTCGAGCTCTTCTCCCACGAATGAGCATGTCAATGCTTCATTGCCCGAGGAAGAATGCTTTGATGGACCTTCAGGGAATGAAGAAAGTTCCTTTCCTGAGTGGGAATCAAGTGATCATTCTGTTTCGCCACATGCGAGGTCTGAGAGTGGTGTCAGTGTTGCTAGCCTCATAAAGAAACTCACTTCTACCGGGCAAAGTCAGAGTCCAACACCTTCTTTTCTTGATGATAATGAACATGAAGGGTATGCTAGTAGTAGTGTGACAAGTTCTCCTTGTAGAGAGCGTGAATGTGGTCAACAACAACAACCACCTTCAGACCATAAACTTGTTTGTCCCCTGCGAATTAGAGGGCGCCAAGCATTCAATGATTTGCTTATGCAGATGGAGAAGGACAGGCATAGGGAGCTCAACAACTTGGCAGAGCGTGGAGCAGTTTCTAAGTTCGCACAAAGAGGTCGCATTCAGGCATTGCTTCGGATTAAATTATTGCAACGTGACATGGCGGATAGTCATCGGTCCCACCAGAAATCAACATTATGTGAATTAAACAACAGACAAACACAAGGGTCTGCAATTATGCAACTAAGGGAAAGATTTACCAGCGGGGTTGAACTTAGAACTACTGTCCAGGCAGAAGTAGCTAACCCAAGAAGTCCTCAAAGAGAGGAAGTTAACAAAACCACTCAATTGGGTAACTCTGCCACCACTGATCAACTCAGAAAAGACACAAGAAACCAGAAAGCTCATGGCAGTGACAATCTCGCCACAAAATCCACACAAAAGTCAGTTTCACATACTAGAATAGATCATAATAATACAAAAGAAGCTTCTCCAAGTTCAGATGTCATGGTCCAAGAAACACATCCACGTTCAGATGCCAAGGCTCTACACAATACCTTAAAAGAAACTAGTGAGTGTGAGGCAACTACATCCATGATTGATTCAAGTATAAATGAGATGACAGACAGGGCAGAGGAGAGTAGCGAAAAGAATGGTATTACTAAAAGTAGTAATGATGAGACAGTGAATGAGAAAGATATTAGTAACCCACAGTATGCTGAATCCAGTTACAAGGAGAAAATAGAAGAGGCAATTGATCAGAACTATGCTGAAAGCAGTTATGGTGATGAGATGGAGGAAGAGGAAATTGACCAGAATTGTGATGATGAAACTAATTATGACTGGATCAGTGAAATTTCTAGGCCTAGGAGCTATTGGGAAGAGCGTAGGCAAGCCTGGTATAGAGAGATGCTTGAAACTGGTTCTCAAAATGAGGATATAAAGAGGCTTCTTGAAAGGAGAACAGTGTCAAGTTTCCTTTCCAGTGACTTCAGGGATAAAATGGATAGATTGATGGTATCTCATAGGGGAACACAATCACATTTAGTCAATAGTCAAGACCATGAGGAAAACAGCCAAGAATTGATGGCATTTTTACAAGAACGCTTGCATTCTGCAAGAACTTCTCAAGAAGAGGGAAGAGAAGCAACTGAGGAAGAAGAAGAAGAAGAGGAGAAGAGAAGTCACACAGAGGAAGAGGAAGAGGAGGATAATGCAGATGAGCATGAAGAGGAGAACGAGCATGAGGAGGAGAGCTTGATAAGTGATTCATATCATGAAGCTGCTGATCGTTCCTCATCATGGAGTTACAGGGACAATGAAGCCGGTGATGATTTTGATAGAGTTGTTTCTACATCTCCACAACCTTATCAATCTCAACCTTTCTATCAGGATAGTAGGCAATCTCCATCCACCAATCATCATTCAATGGAAATGGAACTCATATATGATTTGAGAGGGCACATGGAGCAACTCTATCACGAGATGTCTGAGCTAAGGAAAACAATAAAGGGATGCATGAATATGCAGATAGAATTACAACAAAACATGAAACATGAGGTTCACTCAGTTAAAAAAGAAGAAAAGAAGTGCCGTAACAGGACTCCAAAGAAAGGCAACTGCTGCATTTGCTATGAGGTGAAAGTTGACACGGTCTTGTACAGGTGTGGCCACATGTGTGCGTGTCTGAAGTGTGCCATAGAGTTGCAATGTAACAGTGGAAAATGTCCCATATGTCGGGCTAAAATAGTGGATGTTGTTCGAGTATATGTTGACGGTTAG | 2766 | 0.4396 | MAPSEVDVVSSSSFGCVLRDRNNREACRESNVKGTHNDHATLQRNIKNFVMDLNTCMGVSSVSTTNENENNNNTTTTTTSSSSKNKGVNQRKAPKNNRLERLRFTRANSFNNGGSSSTNNKESSLALLISPRHSRLLDRWAARQAREMVSNLANEVELLSMDEGDMFPRTPSSSEEESTSSEIPNMAASSLVQIWEKRLKQSVVSKTNTLSEKIGSSSSPTNEHVNASLPEEECFDGPSGNEESSFPEWESSDHSVSPHARSESGVSVASLIKKLTSTGQSQSPTPSFLDDNEHEGYASSSVTSSPCRERECGQQQQPPSDHKLVCPLRIRGRQAFNDLLMQMEKDRHRELNNLAERGAVSKFAQRGRIQALLRIKLLQRDMADSHRSHQKSTLCELNNRQTQGSAIMQLRERFTSGVELRTTVQAEVANPRSPQREEVNKTTQLGNSATTDQLRKDTRNQKAHGSDNLATKSTQKSVSHTRIDHNNTKEASPSSDVMVQETHPRSDAKALHNTLKETSECEATTSMIDSSINEMTDRAEESSEKNGITKSSNDETVNEKDISNPQYAESSYKEKIEEAIDQNYAESSYGDEMEEEEIDQNCDDETNYDWISEISRPRSYWEERRQAWYREMLETGSQNEDIKRLLERRTVSSFLSSDFRDKMDRLMVSHRGTQSHLVNSQDHEENSQELMAFLQERLHSARTSQEEGREATEEEEEEEEKRSHTEEEEEEDNADEHEEENEHEEESLISDSYHEAADRSSSWSYRDNEAGDDFDRVVSTSPQPYQSQPFYQDSRQSPSTNHHSMEMELIYDLRGHMEQLYHEMSELRKTIKGCMNMQIELQQNMKHEVHSVKKEEKKCRNRTPKKGNCCICYEVKVDTVLYRCGHMCACLKCAIELQCNSGKCPICRAKIVDVVRVYVDG* | 922 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 61 | 92 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 276 | 323 | - | - | |
Phac9g04052 | 921 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 851 | 920 | IPR013083 | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 534 | 567 | - | - | |
Phac9g04052 | 921 | PANTHER | BNAC05G24000D PROTEIN | 1 | 920 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 710 | 746 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 779 | 801 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 534 | 548 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 209 | 226 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 424 | 454 | - | - | |
Phac9g04052 | 921 | Coils | Coil | 701 | 747 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 209 | 264 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 244 | 264 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 276 | 321 | - | - | |
Phac9g04052 | 921 | SUPERFAMILY | RING/U-box | 868 | 914 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 700 | 801 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 424 | 511 | - | - | |
Phac9g04052 | 921 | CDD | mRING-HC-C3HC5_NEU1 | 866 | 918 | - | - | |
Phac9g04052 | 921 | Pfam | Zinc finger, C3HC4 type (RING finger) | 866 | 913 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 549 | 567 | - | - | |
Phac9g04052 | 921 | ProSiteProfiles | Zinc finger RING-type profile. | 869 | 908 | IPR001841 | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 103 | 122 | - | - | |
Phac9g04052 | 921 | Coils | Coil | 142 | 162 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 61 | 122 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 163 | 184 | - | - | |
Phac9g04052 | 921 | MobiDBLite | consensus disorder prediction | 760 | 774 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g04052 | Phac-Chr9 | 38747210 | 38752502 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g04052 | 869 | 917 | C3H Transcription Factor Family | AT3G06140 | 42.857 | 2.40e-06 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g04052 | - | - | vun:114162588 | 1240.33 |