Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04051 ATGAAAGAAGCGTCAATGAGGATTTCAAACCTTGCTATTGTGCTCCTCCTTTGTTTTTCTTGTGCTCTGCTTTGCCGTGGAAATGAGAGCACCATGAGAGTGCTTTTGGAGGTGAAGTCATCGTTCACTGAAGACCCAGAAAATGTTTTGAGTGATTGGTCAGAGAACAACACCGATTACTGTAGTTGGAGAGGGGTGTCATGTGGGTCAAAGAAGGTCGATTCTTTGAATGCTGATGACGACTCGGTGCAAGTGGTGGGACTCAACCTGTCCGAGTCATCACTCGGTGGGTCGATATCACCCTCACTCGGTCGTTTGCAAAACCTGCTCCACCTTGATCTCTCTTCTAACCGCCTCGAGGGTCCCATTCCACCTGCCCTCTCCAACCTCACTTCGTTGGAGTCTCTCTTTCTCCACTCCAACCAACTCACCGGTCAAATCCCAAGCGAGTTAGACTCGCTAACGCGTCTCCGAGTTTTGCGAATCGGTAACAACCAACTCAGTGGCCCCATTCCCGAAACACTTGGATATATGTACAACCTTGAGTACATTGGTTTGGCCTCATGCAGACTCAGTGGTCCGATCCCTGGCAACCTCGCTCGACTCGCTGAGTTGCAGTATTTGATTCTGCAGGATAACGAGTTGACGGGGCCGATTCCGTTCGAAGTGGGGTACTTCTGGAGCCTTGTAGTCTTCACCGCCGCTGGGAACAGACTCAATGGCTCGATTCCGAGTGAACTGAGTCTGATCAGGAAACTTCAAATTCTGAACCTTGCCAACAACAGCTTAACCGGGTCGATTCCGAGTCAACTCGGGAAGCTAAGTCAGCTTACATATCTGAATTTCATGGGGAACCAACTCGAGGGTCGTATTCCACCGTCTTTGGCTCAATTGGGTAACCTTCAAAATCTTGACTTATCAAATAATACGCTTAGTGGGGAAATTCCAAAGGAGTTAGGGAAGATGGGTCAGTTACAATATTTGGTTCTATCTGGGAACAACCTCTACGGGACCATTCCAAGAACCATATGTTCCAATGCAACAAGTTTGGAGAATTTGCTGATAGCAGATAATGTACTTCATGGTGAGATACCAGCTGAGTTGGGTCAGTGCCAATCCCTGAAACAACTTGATTTATCAAGCAATTATCTCAATGGGTCAATACCTACTGAGCTTTATGGGTTGATGGGGCTAACTGATCTCTTGCTTCACAACAACACTTTGGTTGGTTCAATCTCTCCCTTCATAGGAAACCTCACTGAAATGCAGACTCTTGCATTGTTTCATAACAACTTGCAGGGTCCTCTACCCAGAGAGATTGGGATGCTTGGGAAATTGGAGATAATGTATCTTTATGATAATCAGTTGTCAGGGAAGATTCCTTTGGAGATTGGTAACTGTTCAAGCTTGCAAATGGTTGATTTATATGGAAACCATTTCAGTGGTGCAATTCCCTTCACTCTAGGGAGGCTGAAAGAGTTGAACTTTTTGCACCTTAGGCAGAATGAGCTTGTGGGTGTGATTCCCCCCACACTTGGGAACTGTCATAAACTGGCTGTGCTGGATTTGGCGGATAATCGGCTCTCAGGTGGCATTCCTGCAACATTCGGATTCCTCAAAGAGTTGAAGCAGTTCATGCTCTACAACAATTCTCTTGAAGGTAGTCTTCCTCACCAGCTTGTAAATGTAGCAAACCTGACCAGAGTGAATCTTTCAAATAACAGACTGAATGGTAGTTTGGCTGCATTATGTAGCTCTAGGTCCTTTCTTTCTTTTGATGTCACGGATAATGAATTCGACGGTGAAATACCCTTTCTCCTGGGAAATTCACCTTCCCTTGAGAGGCTGAGATTGGGTAACAACAAGTTTTCTGGTGAAATTCCAAGGACATTGGGAAAAATCACCACATTGTCATTGTTAGACGTCTCAGGAAATTCACTCACAGGTCGAATACCAGACGAGCTTTCTCTGTGTAATAACCTGACTCACCTTGATTTAAACAATAATCTTCTAACTGGACACATACCAACATGGCTTGGAAGTTTGCCTCAGTTGGGTGAGGTTAAGCTCTCGTTCAATCAATTTTCAGGGTCTATTCCACTAGGCCTACTCAAACAACCCAACTTGCTGGTTCTTTCCTTGAATAACAATTCTCTTAGTGGAAGTCTCCCAGGTGATATTGGTGATCTTGTGTCTCTTAATACCCTCAGGCTTGACCATAATAACTTCTCAGGACCAATCCCTCAAGCAATAGGTAAATTGAGCAATCTTTATGAGCTGCAGCTATCCAGCAATGGCTTTAGTGGGGAAATACCAATTGAGCTTGGAAGTCTCCAAAATGTCCAAAGCATTTTGGACTTAAGTTACAATAATCTCTCTGGTCATATCCCATCTTCACTTGGCATGCTGTCAAAATTGGAAGCACTTAATATTTCTCACAATGAACTCTCTGGAGAAGTGCCTTCAGTAGTTGGTGAAATGACTAGCTTGCAGGAGCTTGACATGTCTTACAACAACCTTCAAGGTGCATTGGATAAGAAATTCTCCCGCTGGCCCCATGAGTCGTTTGAAGGCAACCATCTTTGTGGAGCATCTCTTGCAAGCTGCAACAGTGGTGATGGTTCCAACAATAAAAGATCAGTCTTCAGCAACACATCAGTGGTTATAATCTCTACACTTTCAACTTTAGCTGCAATTGCTTTACTTGTACTTGTAGTGATCGTTTTCCTTAAAAACAAGCAAGAATTTTTCAAGAGAGGCAGTGAAGTAAGTTTTGTTTTCTCCTCTTCATCACGAGCACACAAACGATCGTTGATCCCTCTAACTGTGCCTGCAAAGAGAGATTTCAGGTGGCAAGATATCATGAGTTCCACAAACAATCTAAGCGACGAGTTTGTTGTTGGTTGTGGAGGTTCTGGGACAGTGTACAGAGTTGAATTGCCCTCTGGAGAGATCGTGGCTGTGAAGAAGATTTCAGGAAAAGATGATTATCTGTTGAACAAAAGCTTTATAAGAGAAATCAAGACTTTAGGGAGAATCAAACATAGGCATCTGGTAAAACTGATGGGTTGTTGTAGCAACAGAAACAGAGGAACAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTTTGGGATTGGTTACATGGGGTGCCCCTCAAAGCAAAGAAGATCCTTGATTGGGACACAAGGTTCAAAATTGCCATAGGATTAGCTCACGGAGTGGAGTACCTCCATCACGATTGTGTGCCAAAGATCATTCACAGGGACATCAAATCCAGCAACATATTACTAGATTCCAACATGGAGGCACACCTGGGAGACTTTGGTCTGGCAAAATCACTTGTTGAGAATCCAGAATCTAACACAGAGTCTAATTCTTGCTTTGCTGGATCTTATGGATACATAGCCCCAGAGTATGCATTCTCACTGAAGGGCACAGAGAAAACTGATGTGTACAGCATGGGAGTTGTGCTTATGGAACTCGTTACTGGTAAAATGCCAACAGATGAAGCTTTCAGAGCAGAGATGGACATGGTGAGATGGGTGGAGATGCACCTTAACAAGGAAGGCATTGCGGTTGAAGCAGTGATAGATCCTCAGCTGAAACCCCTTTTGCCTGGTGAAGAGTTTGCTGCATTGCAGGTGCTCGAGATAGCCATACAGTGCACAAAAACTGCACCACAAGAGAGGCCAACATCAAGGCAAGTATGCGATCATCTCCTGCATGTATCCAACAACAAAATTGTGGATTTTGAGAAGAAGAATCTAGATCATTACTGGTGA 3795 0.4416 MKEASMRISNLAIVLLLCFSCALLCRGNESTMRVLLEVKSSFTEDPENVLSDWSENNTDYCSWRGVSCGSKKVDSLNADDDSVQVVGLNLSESSLGGSISPSLGRLQNLLHLDLSSNRLEGPIPPALSNLTSLESLFLHSNQLTGQIPSELDSLTRLRVLRIGNNQLSGPIPETLGYMYNLEYIGLASCRLSGPIPGNLARLAELQYLILQDNELTGPIPFEVGYFWSLVVFTAAGNRLNGSIPSELSLIRKLQILNLANNSLTGSIPSQLGKLSQLTYLNFMGNQLEGRIPPSLAQLGNLQNLDLSNNTLSGEIPKELGKMGQLQYLVLSGNNLYGTIPRTICSNATSLENLLIADNVLHGEIPAELGQCQSLKQLDLSSNYLNGSIPTELYGLMGLTDLLLHNNTLVGSISPFIGNLTEMQTLALFHNNLQGPLPREIGMLGKLEIMYLYDNQLSGKIPLEIGNCSSLQMVDLYGNHFSGAIPFTLGRLKELNFLHLRQNELVGVIPPTLGNCHKLAVLDLADNRLSGGIPATFGFLKELKQFMLYNNSLEGSLPHQLVNVANLTRVNLSNNRLNGSLAALCSSRSFLSFDVTDNEFDGEIPFLLGNSPSLERLRLGNNKFSGEIPRTLGKITTLSLLDVSGNSLTGRIPDELSLCNNLTHLDLNNNLLTGHIPTWLGSLPQLGEVKLSFNQFSGSIPLGLLKQPNLLVLSLNNNSLSGSLPGDIGDLVSLNTLRLDHNNFSGPIPQAIGKLSNLYELQLSSNGFSGEIPIELGSLQNVQSILDLSYNNLSGHIPSSLGMLSKLEALNISHNELSGEVPSVVGEMTSLQELDMSYNNLQGALDKKFSRWPHESFEGNHLCGASLASCNSGDGSNNKRSVFSNTSVVIISTLSTLAAIALLVLVVIVFLKNKQEFFKRGSEVSFVFSSSSRAHKRSLIPLTVPAKRDFRWQDIMSSTNNLSDEFVVGCGGSGTVYRVELPSGEIVAVKKISGKDDYLLNKSFIREIKTLGRIKHRHLVKLMGCCSNRNRGTGWNLLIYEYMENGSVWDWLHGVPLKAKKILDWDTRFKIAIGLAHGVEYLHHDCVPKIIHRDIKSSNILLDSNMEAHLGDFGLAKSLVENPESNTESNSCFAGSYGYIAPEYAFSLKGTEKTDVYSMGVVLMELVTGKMPTDEAFRAEMDMVRWVEMHLNKEGIAVEAVIDPQLKPLLPGEEFAALQVLEIAIQCTKTAPQERPTSRQVCDHLLHVSNNKIVDFEKKNLDHYW* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04051 1264 SMART serkin_6 961 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04051 1264 SMART LRR_typ_2 106 129 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 754 778 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 707 730 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 130 153 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 563 586 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 682 706 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 827 858 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 322 346 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 298 321 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 154 178 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 250 274 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 443 467 IPR003591 -
Phac9g04051 1264 SMART LRR_typ_2 491 515 IPR003591 -
Phac9g04051 1264 Gene3D Phosphorylase Kinase; domain 1 921 1041 - -
Phac9g04051 1264 FunFam LRR receptor-like serine/threonine-protein kinase 274 347 - -
Phac9g04051 1264 SUPERFAMILY RNI-like 88 409 - -
Phac9g04051 1264 PRINTS Leucine-rich repeat signature 301 314 - -
Phac9g04051 1264 PRINTS Leucine-rich repeat signature 803 816 - -
Phac9g04051 1264 ProSiteProfiles Protein kinase domain profile. 961 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g04051 1264 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 508 1243 - -
Phac9g04051 1264 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 563 873 - -
Phac9g04051 1264 Pfam Leucine rich repeat N-terminal domain 34 68 IPR013210 -
Phac9g04051 1264 Pfam Leucine rich repeat 784 840 IPR001611 GO:0005515
Phac9g04051 1264 Pfam Leucine rich repeat 517 576 IPR001611 GO:0005515
Phac9g04051 1264 Gene3D Ribonuclease Inhibitor 536 873 IPR032675 -
Phac9g04051 1264 SUPERFAMILY Protein kinase-like (PK-like) 936 1245 IPR011009 -
Phac9g04051 1264 ProSitePatterns Protein kinases ATP-binding region signature. 967 990 IPR017441 GO:0005524
Phac9g04051 1264 Gene3D Ribonuclease Inhibitor 198 293 IPR032675 -
Phac9g04051 1264 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 200 - -
Phac9g04051 1264 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 375 537 - -
Phac9g04051 1264 Pfam Leucine Rich Repeat 660 682 IPR001611 GO:0005515
Phac9g04051 1264 Pfam Leucine Rich Repeat 108 130 IPR001611 GO:0005515
Phac9g04051 1264 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 923 1041 - -
Phac9g04051 1264 SUPERFAMILY RNI-like 351 717 - -
Phac9g04051 1264 SUPERFAMILY L domain-like 651 852 - -
Phac9g04051 1264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Phac9g04051 1264 FunFam Leucine-rich repeat receptor-like protein kinase 1042 1261 - -
Phac9g04051 1264 Gene3D Transferase(Phosphotransferase) domain 1 1042 1262 - -
Phac9g04051 1264 Gene3D Ribonuclease Inhibitor 28 197 IPR032675 -
Phac9g04051 1264 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 204 273 - -
Phac9g04051 1264 Gene3D Ribonuclease Inhibitor 294 535 IPR032675 -
Phac9g04051 1264 Pfam Protein kinase domain 966 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04051 Phac-Chr9 38739228 38744288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04051 48 700 Receptor kinase-like Gene Family AT5G56040 35.337 1.40e-97 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac9g04051 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04051 - - gmx:100797153 2011.11