Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04009 ATGGCGCCGGGAGTCGGAGGCCTGCAGCTCACTTCCCTCGCCGCCGCCGCCTCTGATTCCGATGACCTCGAGGATGTGCGGCTCTTGGACTCCTACGACGAAATCGATGCTGGAGCGAGGCGGATTCAGGTGGCGGTCACCGGCATGACCTGCGCCGCTTGCTCCAATTCCGTCGAATCAGCTCTCAAATCACTCGACGGAGTTATCAGCGCCTCCGTCGCACTGATTCAGAACAAAGCCGACGTAGTTTTCAACTCGGCTCTGCTCAAGGATGAAGACATTAAAAATGCAATTGAAGATGCTGGGTTTGAAGCAGACATATTACCTGAATCCGGTACTGTTGGAAAGATGCCACATGGAACCTTGGTGGGACAGTTCACAATTGGAGGTATGACATGTGCAGCATGTGTAAATTCCGTTGAAGGCATTTTAAGAAAGCTTCCAGGGGTCAAGAGGGCGGTGGTAGCTTTGGCTACTTCGTCAGGTGAAGTTGAATATGATTCCAGTGTAATTAGTAAAGATGATATAGTCAACGCGATTGAAGATTCCGGCTTTGATGCTTCATTTTTACAAAGCAATGAACAGGATAAAATAATTTTAGGGGTGGTTGGTGTGTACAGTGTGATTGATGGACAAGTTTTAGAGGGCATTATTAGCAGCATAAAAGGAGTCAGGCAGTTTCATTTTGACCAGATTTCAGGTGAATTGGATGTTCTGTTTGATCCTGAAGTTCTCAGTTCTAGATCCTTAGTTGATGCAATCCAGGGGGGAAGCAATGGGAAGTTTAAATTACATGTTAGAAGCCCTTATATGAGAATGACTTCTAAAGGCGTTGAAGAGATCTCAACTATATTTCGGCGCTTTATCTCCAGTCTGTTTCTTAGTATTCCTCTCTTCTTCGTGAGGGTAGTTTGTCCTCATATACCATTCATGTATTCCCTGTTACTTCAGCGATGTGGGCCTTTCCTCATGAGTGATTGGTTGAAATGGGCATTGGTGAGCCTGATCCAATTTGTGATCGGTAAGTGCTTCTATATTGCAGCTGGAAGAGCTCTTAGAAATGGTTCTACAAACATGGATGTCCTGGTTGCAGTGGGAACTACCGCTTCTTATGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCTCCAACTTACTTTGAAACAAGTGCTATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCTATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTACTAGTTGTCAAAGATAAAGGTGGTAAATGTATTGAAGAAAGGGAAATTGATTGTTTGCTTGTTCAACCTGGGGACACATTGAAAGTTCTTCCTGGTGCAAAGATCCCTACCGATGGTATTGTTACTTGGGGCTCAAGTTATGTAAATGAAAGCATGGTAACTGGTGAATCTGTACCTATTTTGAAGGAGGTGAATGCTCCTGTTATTGGAGGCACAATAAATTTTCACGGTGTCCTTCATGTTCGAGCTTCCAAAGTAGGATCTGATACAGTTTTGAGCCAGATTATTAGTTTGGTTGAGACAGCGCAGATGTCCAAAGCTCCTATTCAGAAGTTTGCTGATTATGTGGCAAGCATATTTGTTCCTATGGTCGTTTCTTTGGCATTATTGACATTATTGTGCTGGTACATTGCTGGGGCTATTGGAGCTTACCCAGAAGAGTGGCTGCCAGAAAATGGGAATCACTTTGTTTTTGCCCTGATGTTCTCAATATCTGTAGTAGTGATTGCATGTCCCTGTGCCGTTGGCTTGGCAACACCAACGGCTGTGATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTGTTAATTAAAGGTGGAGATGCATTGGAAAGGGCCCAGAGGGTTAAGTATGTGATATTTGATAAAACAGGCACTCTGACTCAGGGAAAAGCTACTGTTACTACTGCCAAGACATTCACAGGAATGGAACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTAGCAAATGCAATATTAGCATATGCACGCCATTTTCATTTCTTTGATGACTCGTCTGCTGATACCGGTACCAAGAATGATGCGAAAACTGGTTGGCTTTTTGACGTCTCAGACTTCTCTGCTCTTCCCGGAAAAGGCGTTCAATGTTTCATAGATGGAAAGCTTATTTTGGTTGGTAACAGGAAGTTGATGGTGGAAAATGGTATACATATTTCAACAGAGGTGGAAAATTTTGTGGTAGAGCTTGAAGAAAGTGCTAAGACAGGGATACTGGTAGCATATAACGATATATTAACTGGAGTCTTGGGGATTGCGGATCCACTAAAGAGAGAAGCTTCTGTAGTCATAGAGGGTCTCCAGAAAATGGGTGTCACACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGTGCTGTTGCTAAGGAGGTTAACATATCAGATGTTAGGGCAGAGGTTTTGCCAGCAGGAAAAGCTGATGTTGTTCGTTCATTCCAAAAAGATGGAAGCATAGTTGCAATGGTGGGTGATGGCATCAATGATTCTCCTGCATTAGCTGCAGCTGATGTTGGTATGGCCATCGGAGCTGGAACTGATATTGCAATTGAAGCCGCAGACTATGTGCTGATGAGAAATAACTTAGAAGATGTGATCACAGCCATTGATCTTTCCCGAAAGACCTTCTCTCGAATTCGATTGAATTATGTGTTTGCAATGGCTTACAATGTTGTGGCCATACCAGTTGCCGCTGGTGTTTTCTACCCTTCACTGAGGATCAAGCTACCACCGTGGGTTGCTGGTGCCTGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCTTTGCTTCTTAAAAGATATAGAAGACCCAGACTTACTGCAATACTTGAAATAATTGTAGAATAG 2967 0.4375 MAPGVGGLQLTSLAAAASDSDDLEDVRLLDSYDEIDAGARRIQVAVTGMTCAACSNSVESALKSLDGVISASVALIQNKADVVFNSALLKDEDIKNAIEDAGFEADILPESGTVGKMPHGTLVGQFTIGGMTCAACVNSVEGILRKLPGVKRAVVALATSSGEVEYDSSVISKDDIVNAIEDSGFDASFLQSNEQDKIILGVVGVYSVIDGQVLEGIISSIKGVRQFHFDQISGELDVLFDPEVLSSRSLVDAIQGGSNGKFKLHVRSPYMRMTSKGVEEISTIFRRFISSLFLSIPLFFVRVVCPHIPFMYSLLLQRCGPFLMSDWLKWALVSLIQFVIGKCFYIAAGRALRNGSTNMDVLVAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLVVKDKGGKCIEEREIDCLLVQPGDTLKVLPGAKIPTDGIVTWGSSYVNESMVTGESVPILKEVNAPVIGGTINFHGVLHVRASKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPMVVSLALLTLLCWYIAGAIGAYPEEWLPENGNHFVFALMFSISVVVIACPCAVGLATPTAVMVATGVGANNGVLIKGGDALERAQRVKYVIFDKTGTLTQGKATVTTAKTFTGMERGEFLKLVASAEASSEHPLANAILAYARHFHFFDDSSADTGTKNDAKTGWLFDVSDFSALPGKGVQCFIDGKLILVGNRKLMVENGIHISTEVENFVVELEESAKTGILVAYNDILTGVLGIADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVNISDVRAEVLPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAIPVAAGVFYPSLRIKLPPWVAGACMALSSVSVVCSSLLLKRYRRPRLTAILEIIVE* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04009 988 SUPERFAMILY Calcium ATPase, transmembrane domain M 379 936 IPR023298 -
Phac9g04009 988 Gene3D - 124 189 - -
Phac9g04009 988 FunFam Copper-exporting P-type ATPase A 38 108 - -
Phac9g04009 988 SUPERFAMILY HMA, heavy metal-associated domain 38 109 IPR036163 GO:0046872
Phac9g04009 988 NCBIfam heavy metal translocating P-type ATPase 359 971 IPR027256 GO:0006812|GO:0016020|GO:0019829
Phac9g04009 988 Gene3D - 612 919 IPR023214 -
Phac9g04009 988 SUPERFAMILY HMA, heavy metal-associated domain 119 194 IPR036163 GO:0046872
Phac9g04009 988 ProSiteProfiles Heavy-metal-associated domain profile. 40 106 IPR006121 GO:0046872
Phac9g04009 988 FunFam Probable copper-transporting ATPase HMA5 751 919 - -
Phac9g04009 988 Pfam haloacid dehalogenase-like hydrolase 641 876 - -
Phac9g04009 988 SFLD C1.7: P-type atpase like 627 914 - -
Phac9g04009 988 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 32 980 - -
Phac9g04009 988 ProSitePatterns Heavy-metal-associated domain. 128 157 IPR017969 GO:0046872
Phac9g04009 988 NCBIfam HAD-IC family P-type ATPase 398 666 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g04009 988 NCBIfam HAD-IC family P-type ATPase 732 943 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g04009 988 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Phac9g04009 988 PRINTS P-type cation-transporting ATPase superfamily signature 481 495 - -
Phac9g04009 988 PRINTS P-type cation-transporting ATPase superfamily signature 809 819 - -
Phac9g04009 988 PRINTS P-type cation-transporting ATPase superfamily signature 885 897 - -
Phac9g04009 988 PRINTS P-type cation-transporting ATPase superfamily signature 645 659 - -
Phac9g04009 988 PRINTS P-type cation-transporting ATPase superfamily signature 787 798 - -
Phac9g04009 988 Gene3D - 413 535 - -
Phac9g04009 988 NCBIfam copper ion binding protein 42 105 IPR006122 GO:0005507
Phac9g04009 988 NCBIfam copper ion binding protein 125 187 IPR006122 GO:0005507
Phac9g04009 988 SFLD p-type atpase 627 914 IPR044492 -
Phac9g04009 988 SUPERFAMILY HAD-like 644 968 IPR036412 -
Phac9g04009 988 ProSitePatterns E1-E2 ATPases phosphorylation site. 647 653 IPR018303 -
Phac9g04009 988 ProSitePatterns Heavy-metal-associated domain. 46 75 IPR017969 GO:0046872
Phac9g04009 988 Gene3D - 39 110 - -
Phac9g04009 988 SUPERFAMILY Calcium ATPase, transduction domain A 446 531 IPR008250 -
Phac9g04009 988 ProSiteProfiles Heavy-metal-associated domain profile. 122 188 IPR006121 GO:0046872
Phac9g04009 988 Gene3D - 652 741 IPR023299 GO:0000166
Phac9g04009 988 Gene3D - 742 793 IPR023299 GO:0000166
Phac9g04009 988 FunFam Copper-transporting ATPase RAN1 652 741 - -
Phac9g04009 988 CDD HMA 125 188 IPR006121 GO:0046872
Phac9g04009 988 Pfam Heavy-metal-associated domain 126 186 IPR006121 GO:0046872
Phac9g04009 988 Pfam Heavy-metal-associated domain 44 104 IPR006121 GO:0046872
Phac9g04009 988 CDD HMA 43 105 IPR006121 GO:0046872
Phac9g04009 988 FunFam Copper-exporting P-type ATPase A 121 190 - -
Phac9g04009 988 PRINTS H+-transporting ATPase (proton pump) signature 834 850 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g04009 988 PRINTS H+-transporting ATPase (proton pump) signature 862 878 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g04009 988 PRINTS H+-transporting ATPase (proton pump) signature 893 918 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g04009 988 FunFam Copper-exporting P-type ATPase 742 793 - -
Phac9g04009 988 CDD P-type_ATPase_Cu-like 286 958 - -
Phac9g04009 988 FunFam Copper-transporting ATPase 1, putative 413 535 - -
Phac9g04009 988 Pfam E1-E2 ATPase 428 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04009 Phac-Chr9 38469349 38476965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04009 1 988 Primary Pumps ATPases AT5G44790 74.354 0.0 1502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04009 K17686 - gmx:100804960 1749.18