Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04005 ATGGAGTGTGCAGCAGATGAGAGAGTTTGGAATCTTAGGCAAAAGGTGTTAGTGTTTCAAGCGGCAGTTATGTGGTATTGTGTATGCTTTGCAAAGAGGCACGGAAAGATGATGGAAGCGAATTTAATCTGCCTACCCCACTTGGGGCTGATTTTCTATTCCCAAAGGTTCATGGTCTTCTCAACTGCTTTCCTCCATGAAGGTGGCCCCTTTTTTTCTAGAAAAAGGCCAAGAGAATTAGATCACGGACATCAAGATATAGATTTACATGCAGATGCAGGAATTTCCAGTGATTTTTCCTTCTTTTCCTCGGATCAAAATATAGAAAGGTGCATTAGTGCTGGTGATGTTCCCTCTTCCAGTAACACTGACGATAAAGTTGATCCAGATTCGGGAATGGAGATGAGCTGTCCATCAAATGTTAATAGTGGCTATCTTCCTGTGTGTTCCACCACAGCGAATATATCACACCCGGAACAGAGTTTCTGTGGCTATGTGCAACAGCCCGCTTTAGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATCAAGGAGCAGTTGTATGAGGGCCTAACTACTGGTTTCTTGCCATCTGAGCTTCCTGTGTATCCAGTGATTAATGCCACAATAATGAACCCTGTACCACTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACTGGGTTTGCATATCTGATTATGGGTATCTCAGACACAAGGTTGCCTACAATGGCAGTATATGAACAAGATAAATCTTTTGAGCTTGCTGCTCCTCTGGCTGGTAACCCAGATTCACAGTCTGTGTCACATTCACATGTCAATTACTGCAGTAAGGAATCCAATCACTTAAATCCACACTCAGAGGCATTCAACAGTTTAATATCTTGTCAGATGTTACGTGAAGAATGCTGTTGGCTTTATGAGGATGAGAAGGGTATGAAACATGGGCCACATTCTATCAATGAATTGATTTCTTGGCACAGTCGTGGATATCTTAAAGATTCAACAGTGATCTTTCATTCTGATAAGAAGTATGACACCTTTGTGCTAGTGTCTGTTGTCAATGCATTAAAAGGAGATACCACTGGAACCATTTGTAGATCAGGTTCTACAAGTAATGAGGTTGGCGATATGGTAGACTTGATTAGTGAAATATCTGAGAACATTTCTTCCCAATTGCACATGAGTATCATGAAAGCTGGTCGCAGAGTTGTGCTAGATGGAATTATTGGTGATATTATTGCTGAATATGTTACGGAAAAGAAATATAAGAGGCATAAGCTTGAATCAGCTGCCCATACTCCTGAAAACAAGATGTCTAAGTTTTATGTGGAGGTCAGCAAAGGTTCTGCTATTCCCAGTGATTCTTCTACTTCCCATATTCTTGATGATCAGGCTTGTCATGAAAGTTCCAGACTACCTTCAGCCAGTTTTAAATCAGTTGGAAGCGTTGAGAATTTTTGGTGGTCATATGCTGTTGTTCGCAAGGTACTTCTTGATTATTGCATGCAAGTCATGTGGAATGCAGTGTTTTTTGATACAATAGCAGACTACTTATCTTCTTGGAGGAAGAGGACTATTTGGTCTCATCCTGAGCCTCAACCATCTACTAATGGATGTAAATATCATGCTGAAAAGATTGAATCAGAAGCTTTGGCTCCCAAGCCAGATTTCTCTGAAAGCAATGCCGATGGCTATAATCAGTTTGGAGTATTAACAACAAAAAGAAACCATCCTCAGTTATTTTTATCTCCTAGTAGGTTCGAAGGTGGAAACTTACTAAAAGGTCAGAATGTTTCTTCTCCTTACCATGACTATAAAGATTTGACATTCATTCTTGAAAGCGTGGAGAATGAGCTTCACTTGTCTTCAAAGGCATCTTTTGCTGATTACATACGACATTTTGTTGAGAAGGAAGTGAACAAAATAGTTCCTTTCCCAGAAGAAATCATATCAAATGAGGTTGCTGTTAGTGACACTTGTTTTTCAGATATACTGGCTGACGAAACATTTGTGAAGGGAACTCTAAATGACAAGTCTTTGGATTCTGTTGAAGCAGGAAATTCATTTGGCAAGTCTGCATCTGGAAACCTTATGTCTGGTATATTTTCAAAAGCATTTAAGGAGTTGTGTGGATATGTAGATGATGTGGTTGAAGAGGAGACTGATGACCTACCACCTGGAATTGAAGAGAAGTCTCAACCAGTTGTCGTACACCACAATTCGAAATTTCGACCTTCAAGGTTGGTTGAATGTCATCCTAAGATTACAGAATATGTTGCAACTGCACTGTGCCGACAGAAACTGCATGATGAAGTTCTGGAAGAGTGGAAGTCGCTGTTTCTTGATTCTGTGCTCAATCATGTTTTTATATCATCAAGTACCATAAAGAAACATTTTATGTCTGATGGTCAGGAGAAAGGAGAAACATTCAATTCAAGCAAGGAGAATTTGAATGGTGCTACTTCTGGACTGGGAATAGTGAAGGAAGGAGCAAAGAGTTCTTCTGGTGTTCGTCTGGTGATTGGAAAGAATACTTATTGTCGCAAGAAGCTATCACGGAAGGAGTTAGTTTCCTCACAGACTGTAACAGAAAATGATTCTAGGCCAGTGAAGAAGCCAGTGGCCAAGTTAAGGAAACTTGTTTGTGGAGATGTTGGTGAGACTGTTGAGGTTGAAATAGCTTCTGTTAAACATGAAAAGACAAGCAGGATTAAAGGGAAGAAAGATTCATCATCTAAGGGCAGGTCTTCTGTCATTGTCAATGGTAGCTCACACAGTGATAAATTATCTTTAAAGAATAAAGCTGGTCAGAAAGTGTTGAAGGTTTCAGAGAATGTTAAGGATGTTGTGAAATCCACTGTAAAAAAGCTTTCAGTGTCAACTGATAATAGTGTTGGTGAGAAGAAGGTTGTCAAAAGTGATGGCTCTGTTAAAGAGAAAACTACAGCAACGAATAAAGCATCAAAATCAAAAAGGAAACGTCAAATGGATGGTACAACACCTTCACATCCCCCAAAGATTTTGAAAATTTCAAATGGTGGTGCTTATCTGGGAACCAGTAAACAAAATACAGTGGAAAGTACGAAGTCTGCTAAATCCAAACAATTGAATTTGTGTCCTAGATCTGTTGGATGTGCTAGGACTTCTATTGATGGTTGGGAGTGGCATAAATGGTCTAGAAGTGCCAGTCCTGCATATAGAGCACGTGTTAGGGGCCTTCCGTCTGTCCAGAACAAGTGCATATATTCTGAAAATAATTTATCTCAGTTGCCAAATTGTAAGGGTCTTTCTGCAAGAACAAATAGAGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCGGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAGAAGCGGTTACGTTTTCAAAGGAGCAAGATCCATGACTGGGGACTTGTTGCCTTGGAGCCAATTGAGGCAGAGGACTTTGTGATTGAGTATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGGGAACGGGAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCCACAAAGAGAGGTGGGATTGCTAGATTTATTAACCACTCGTGTCAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGACATATAAAGGCTGGTGAAGAAATAACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCATGCAACTGTAGTTCCAGAAAGTGTCGTGGATCATTGAATTAG 3828 0.4013 MECAADERVWNLRQKVLVFQAAVMWYCVCFAKRHGKMMEANLICLPHLGLIFYSQRFMVFSTAFLHEGGPFFSRKRPRELDHGHQDIDLHADAGISSDFSFFSSDQNIERCISAGDVPSSSNTDDKVDPDSGMEMSCPSNVNSGYLPVCSTTANISHPEQSFCGYVQQPALVSGWMYVNENGQMCGPYIKEQLYEGLTTGFLPSELPVYPVINATIMNPVPLNYFKQFPDHVSTGFAYLIMGISDTRLPTMAVYEQDKSFELAAPLAGNPDSQSVSHSHVNYCSKESNHLNPHSEAFNSLISCQMLREECCWLYEDEKGMKHGPHSINELISWHSRGYLKDSTVIFHSDKKYDTFVLVSVVNALKGDTTGTICRSGSTSNEVGDMVDLISEISENISSQLHMSIMKAGRRVVLDGIIGDIIAEYVTEKKYKRHKLESAAHTPENKMSKFYVEVSKGSAIPSDSSTSHILDDQACHESSRLPSASFKSVGSVENFWWSYAVVRKVLLDYCMQVMWNAVFFDTIADYLSSWRKRTIWSHPEPQPSTNGCKYHAEKIESEALAPKPDFSESNADGYNQFGVLTTKRNHPQLFLSPSRFEGGNLLKGQNVSSPYHDYKDLTFILESVENELHLSSKASFADYIRHFVEKEVNKIVPFPEEIISNEVAVSDTCFSDILADETFVKGTLNDKSLDSVEAGNSFGKSASGNLMSGIFSKAFKELCGYVDDVVEEETDDLPPGIEEKSQPVVVHHNSKFRPSRLVECHPKITEYVATALCRQKLHDEVLEEWKSLFLDSVLNHVFISSSTIKKHFMSDGQEKGETFNSSKENLNGATSGLGIVKEGAKSSSGVRLVIGKNTYCRKKLSRKELVSSQTVTENDSRPVKKPVAKLRKLVCGDVGETVEVEIASVKHEKTSRIKGKKDSSSKGRSSVIVNGSSHSDKLSLKNKAGQKVLKVSENVKDVVKSTVKKLSVSTDNSVGEKKVVKSDGSVKEKTTATNKASKSKRKRQMDGTTPSHPPKILKISNGGAYLGTSKQNTVESTKSAKSKQLNLCPRSVGCARTSIDGWEWHKWSRSASPAYRARVRGLPSVQNKCIYSENNLSQLPNCKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIREREYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCQPNCYTKVISVEGQKKIFIYAKRHIKAGEEITYNYKFPLEEKKIPCNCSSRKCRGSLN* 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04005 1275 ProSiteProfiles Post-SET domain profile. 1259 1275 IPR003616 -
Phac9g04005 1275 MobiDBLite consensus disorder prediction 992 1007 - -
Phac9g04005 1275 MobiDBLite consensus disorder prediction 965 1037 - -
Phac9g04005 1275 SUPERFAMILY GYF domain 305 358 IPR035445 -
Phac9g04005 1275 ProSiteProfiles GYF domain profile. 309 365 IPR003169 GO:0005515
Phac9g04005 1275 ProSiteProfiles SET domain profile. 1136 1253 IPR001214 GO:0005515
Phac9g04005 1275 Pfam SET domain 1148 1252 IPR001214 GO:0005515
Phac9g04005 1275 SMART set_7 1136 1259 IPR001214 GO:0005515
Phac9g04005 1275 MobiDBLite consensus disorder prediction 921 938 - -
Phac9g04005 1275 SUPERFAMILY SET domain 1131 1272 IPR046341 -
Phac9g04005 1275 MobiDBLite consensus disorder prediction 114 134 - -
Phac9g04005 1275 CDD SET_SETD1 1124 1271 IPR037841 GO:0042800|GO:0048188
Phac9g04005 1275 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 65 1275 IPR044570 GO:0042800|GO:0051568
Phac9g04005 1275 MobiDBLite consensus disorder prediction 910 943 - -
Phac9g04005 1275 Gene3D - 164 236 IPR035445 -
Phac9g04005 1275 Gene3D - 301 391 IPR035445 -
Phac9g04005 1275 Gene3D SET domain 975 1275 IPR046341 -
Phac9g04005 1275 MobiDBLite consensus disorder prediction 1023 1037 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04005 Phac-Chr9 38435547 38455375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04005 1135 1275 C2H2 Transcription Factor Family AT2G23740 36.196 3.42e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac9g04005 SET 8.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04005 - - gmx:100805708 1904.41