Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03973 ATGAAGTATATTCGGAGCAACAGCTTGAAGAGGCTTTTCTCGTTTGGAAAACGCGGGTTTGGGGAAGAAAACGATGTGGGGTTGGTGGTTCCTTCATGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCCTTTAAAGAGTTGTTTGATGCCACCAATGGTTTTAGCTCAGGGAATTTGGTTGGGAGAGGAGGGTATGCAGAGGTTTATAAGGGCACGTTGCGTGGTGGTGAGGAAGTTGCGGTGAAGAGGCTCACCAGAACTTCAACTGACGAGAGGAAGGAGAAGGAGTTTCTGATAGAGATTGGCACAATTGGTCACGTGCGCCATGCCAACGTGTTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTTGGTTCTGTTGCTTCTGTTATTCACGATGAGAACTTGCCTCCTTTAGATTGGAAAACAAGGTATAAGATAGCTCTTGGGACTGCACGTGGTCTTCACTATTTGCACAAAGGCTGCAAGAGGAGGATAATTCACAGGGACATCAAGTCCTCAAACGTTTTGTTAACAGCAGATTTTGAACCAAAGATATCTGATTTTGGACTAGCAAGGTGGCTTCCATCTCAGTGGACTCACCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATTTGGCACCAGAGTACTATATGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCCTTTGGTGTGTTCTTGCTTGAAATCCTCTCTGGAAGGAAACCAGTGGATGGGTCTCACCAAAGTGTGCACAGCTGGGCTAAACCAATACTAAACAAAGGGGAGATAGAAAAGGTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTAATAGAGTAGCCTTTGCAGCCTCCCTGTGCATTCGGGCATCTGCAACTTGCAGACCTACCATGAGTGAGGTACTGGAGGTAATGGAGGAGTGGGAGATGGATAAAGAGAAGTGGGAAATGGCAGAGGAGAAAGAAGAAGAGGTGGAGCTATGGGGTTTTGAGGATCTTGAATATGCATATGACAGTTCCTTTTCAATGTCTCTACCTGACTCAGTTGGAAGTACTTAG 1116 0.4615 MKYIRSNSLKRLFSFGKRGFGEENDVGLVVPSCEEHPPRPSWKCFSFKELFDATNGFSSGNLVGRGGYAEVYKGTLRGGEEVAVKRLTRTSTDERKEKEFLIEIGTIGHVRHANVLPLLGCCIDNGLYLVFELSTVGSVASVIHDENLPPLDWKTRYKIALGTARGLHYLHKGCKRRIIHRDIKSSNVLLTADFEPKISDFGLARWLPSQWTHHSIAPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEILSGRKPVDGSHQSVHSWAKPILNKGEIEKVVDPRLGGAYDVTQFNRVAFAASLCIRASATCRPTMSEVLEVMEEWEMDKEKWEMAEEKEEEVELWGFEDLEYAYDSSFSMSLPDSVGST* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03973 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Phac9g03973 371 Gene3D Transferase(Phosphotransferase) domain 1 135 351 - -
Phac9g03973 371 SUPERFAMILY Protein kinase-like (PK-like) 35 328 IPR011009 -
Phac9g03973 371 SMART serkin_6 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03973 371 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Phac9g03973 371 CDD STKc_IRAK 63 326 - -
Phac9g03973 371 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03973 371 FunFam Putative receptor-like serine/threonine-protein kinase 27 133 - -
Phac9g03973 371 PANTHER OS08G0249100 PROTEIN 35 352 IPR046958 -
Phac9g03973 371 FunFam Putative receptor-like serine/threonine-protein kinase 135 348 - -
Phac9g03973 371 Pfam Protein tyrosine and serine/threonine kinase 60 265 IPR001245 GO:0004672|GO:0006468
Phac9g03973 371 Coils Coil 324 344 - -
Phac9g03973 371 Gene3D Phosphorylase Kinase; domain 1 32 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03973 Phac-Chr9 38156601 38160772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03973 43 362 Receptor kinase-like Gene Family AT1G71830 39.403 1.07e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phac9g03973 PK_Tyr_Ser-Thr 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03973 - - gmx:100804983 676.011