Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03971 ATGTCCTCTTTGACTAGCATGGCTCCTCAAAAGGCTGTTATTGCTGAAACTGGGGAACGTGTTGACGTGAATGATGTTAAGATCGACACCATACTTGCAGTGAGGTCGGGTGACGCTATTCCTCTTGATGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTACCTGTGATCAAAGAGTTTGATTCAGTAGTATGGGCTGGAACTATTAATGTGAATGGATATATAAGTGTAAAAACTACTGTGCTGGCAAAAGACACAGTGGTGGCTAGAATGTCAAAACTTGTTGAAGAGGCCTCTAGCAGAAAATCTCGAACACAAAGATTCATAGATAATTTTGCTAAGTACTATATTCCTGCTGTTGTTTTGATTTCAGCTAGCATTGCTGTGGTTCCAGCGGCAATAGAAGTTCCTGATATAAAACCTTGGCTCCATCTTGCAATTGTGGTTTTGTTAAGTGCATGCCCCTGTGCTCTCATCCTCTCCACTCCCGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAACAAGTGGGTTACTACTGAAAGGTGGAGATTATATTGAAACACTTTCTGGAATTAAGACAGTGGCTTTTGATAAAACTGGCACAATAACAAGAGGAGAGTTCACAGTGACAGATTTTTCATTTGTAGATGACATTAGCATTGAAACTTTACTGTACTGGGTTTCAAGTATTGAGAGTAAATCAAGTCATCCTATGGCAGCTTCACTGGTGGAATACGGCATGTCTCATTCTGTCAGGCCAATCCCTGAAAATGTGGAGAATTTTGAAAACTTTGCTGGGGAAGGAGTTTTCGGTACTATTGATGGGAAGGATATCTATATTGGCAATAGAAGAATTGGTGCTAGAGCTGACTCCGCAAGAGTTGATTGCCAATTGCAATTGCAAAGCCATGAAATTTCTACCCCGAAAGAACACTGTGGACCGACTCTGGTTGGAGTCTTCAGCTTAGTTGATACTTGCAGATCAGGTGCTTTGGAGGCAATAGAAGAGCTAAAGTTGTTAGGCGTGAGATCTGTCATGCTAACAGGAGATAGCAGTCAAGCTGCTATGTATGTTCAAAGTCAGTTGAACCATGGTCTAGACCTTGTGCACGCAGAGCTTCTACCTGCGGAAAAGGCAGTGATCATTGAGAATTTGAAGAAAGATGGGCTAATAGCCATGATTGGAGATGGCATAAATGATGCTCCTGCATTAGCCACAGCTGATATTGGTATCTCAATGGGAATATCTGGTTCAGCTCTTGCAAATGAGACAGGCAATGCAATTCTTATGTCGAATGACATCCAAAAGATACCTGAAGCCATTCGGCTTGCAAGGAAAACTACTAGAAAGCTCATTGAGAATGTCATTATTTCAGTTGGCTTCAAGAGTGCTATACTTGCATTGGCAATTGCTGGATACCCTATTGTTTGGCTTGCTGTGTTGACTGATGTTGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTAATTTTACAAGAGAAACCAAAATATGCAAGAAAATCTACAAGTTCTAAATATGGCACCTTCTTGGAAGATTTGACCATGAATCTACTGGACAATGAAAGTAACAACATTAAGAACCAAGGGTCTGAAAAATGTCGTAAAGATTGTTGTAAAGACGGCCACGTAGAAACTACAAGCAAGAATGAATCTTCTGGACTTTTGAAGTTGAGCTCACTCAAGGGAAACCACAGTGGAAACTCAGTCGCTATTGAAGTGCATATAGTGAAACCATGCAATGGTTGTTGTCTAAGCAAAGTAAAAATGTATGAGGACTCAGCATGCAGAACAAAGAATGGTTCTGGTTGTTGCCAAGAACAATCTAAGACTGAAAAATGTGTCATTGGTTCTGTAGCCAGAGAAGATGCCGGCATTGCTTCCTTGGAGTCTGATTGCCTTAAGGACAAGTCTGTGGATATTCCAGAGGTTTCTGGGACAGAAGGTATTCCAAAGTGCTGCAATAAGACATGCTGTAATGATAGTTTTAACAATATGACTAGCCTTAGCCATCCAGAAATTATTATAGAGTGA 2082 0.4083 MSSLTSMAPQKAVIAETGERVDVNDVKIDTILAVRSGDAIPLDGIVVEGKCEVDEKMLTGESLPVIKEFDSVVWAGTINVNGYISVKTTVLAKDTVVARMSKLVEEASSRKSRTQRFIDNFAKYYIPAVVLISASIAVVPAAIEVPDIKPWLHLAIVVLLSACPCALILSTPVAIFCALTKAATSGLLLKGGDYIETLSGIKTVAFDKTGTITRGEFTVTDFSFVDDISIETLLYWVSSIESKSSHPMAASLVEYGMSHSVRPIPENVENFENFAGEGVFGTIDGKDIYIGNRRIGARADSARVDCQLQLQSHEISTPKEHCGPTLVGVFSLVDTCRSGALEAIEELKLLGVRSVMLTGDSSQAAMYVQSQLNHGLDLVHAELLPAEKAVIIENLKKDGLIAMIGDGINDAPALATADIGISMGISGSALANETGNAILMSNDIQKIPEAIRLARKTTRKLIENVIISVGFKSAILALAIAGYPIVWLAVLTDVGTCLLVILNSMLILQEKPKYARKSTSSKYGTFLEDLTMNLLDNESNNIKNQGSEKCRKDCCKDGHVETTSKNESSGLLKLSSLKGNHSGNSVAIEVHIVKPCNGCCLSKVKMYEDSACRTKNGSGCCQEQSKTEKCVIGSVAREDAGIASLESDCLKDKSVDIPEVSGTEGIPKCCNKTCCNDSFNNMTSLSHPEIIIE* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03971 693 NCBIfam heavy metal translocating P-type ATPase 1 506 IPR027256 GO:0006812|GO:0016020|GO:0019829
Phac9g03971 693 SFLD p-type atpase 188 457 IPR044492 -
Phac9g03971 693 Pfam E1-E2 ATPase 15 183 - -
Phac9g03971 693 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 511 - -
Phac9g03971 693 CDD P-type_ATPase_HM 1 506 - -
Phac9g03971 693 NCBIfam cadmium family heavy metal-translocating P-type ATPase 1 508 - -
Phac9g03971 693 Pfam haloacid dehalogenase-like hydrolase 201 418 - -
Phac9g03971 693 Gene3D - 216 336 IPR023299 GO:0000166
Phac9g03971 693 FunFam Putative cadmium/zinc-transporting ATPase 3 216 336 - -
Phac9g03971 693 SUPERFAMILY HAD-like 203 505 IPR036412 -
Phac9g03971 693 Gene3D - 196 455 IPR023214 -
Phac9g03971 693 SUPERFAMILY Calcium ATPase, transmembrane domain M 105 199 IPR023298 -
Phac9g03971 693 SUPERFAMILY Calcium ATPase, transduction domain A 19 104 IPR008250 -
Phac9g03971 693 Gene3D - 1 108 - -
Phac9g03971 693 ProSitePatterns Hypothetical cof family signature 2. 404 426 - -
Phac9g03971 693 ProSitePatterns E1-E2 ATPases phosphorylation site. 207 213 IPR018303 -
Phac9g03971 693 PRINTS P-type cation-transporting ATPase superfamily signature 54 68 - -
Phac9g03971 693 PRINTS P-type cation-transporting ATPase superfamily signature 350 360 - -
Phac9g03971 693 PRINTS P-type cation-transporting ATPase superfamily signature 205 219 - -
Phac9g03971 693 PRINTS P-type cation-transporting ATPase superfamily signature 328 339 - -
Phac9g03971 693 PRINTS P-type cation-transporting ATPase superfamily signature 404 423 - -
Phac9g03971 693 PRINTS P-type cation-transporting ATPase superfamily signature 428 440 - -
Phac9g03971 693 SFLD Haloacid Dehalogenase 188 457 - -
Phac9g03971 693 FunFam Copper-transporting ATPase 1, putative 1 108 - -
Phac9g03971 693 NCBIfam HAD-IC family P-type ATPase 5 225 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03971 693 NCBIfam HAD-IC family P-type ATPase 325 485 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03971 Phac-Chr9 38141201 38148103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03971 1 629 Primary Pumps ATPases AT2G19110 54.642 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03971 K01534 - gmx:100815324 1110.52