Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03966 ATGTCAAGTGGTGCAGTAATTGGGGCTATAATCGTTGTTGTGGGGATTTTCTTGAAGATAGGTATTTTGATTTGTGTGTGCAGAAAAAGAAATCAGAAGGATGATAGATCAGGAGTTTCAGGTTCAAAATTTCTGACTCGGACTATGGATAAATTTCTCAATGACATGGAAAGGGAGAAGCCAATCAGATTCACTGGTCAACAACTGAGGATTGCCACTGACAACTACTCTAACTTGTTGGGATCAGGAGGTTTTGGAACAGTTTATAAGGGAATTTTTAGCAATGGAACGGTTGTTGCTGTGAAGGTTCTTCGAGGGAATTCAGACAAGAAAATTGAGGAGCAGTTTATGGCAGAAGTGGGTACCATTGGCAGAATTCATCATTTTAATCTTGTTAGACTCTATGGATTTTGCTTTGAAGAAAACCTGATAGCACTGGTGTATGAGTACATGAGTAATGGCTCTCTTGATAGGTATTTGTTCCATGAAAAGAAGACCCTAGGATATGAAAAGCTTCATGAGATTGCAGTGGGAACAGCTAGAAGCATTGCTTATTTGCATGAGGAGTGCCAACACAGAATAATCCATTACGACATAAAACCAGGAAACATTCTCTTGGATAGGAATTACAATCCTAAAGTTGCTGATTTCGGTTTAGCCAAACTTTGCAACAGGGACAATACTCACATAACCATGTCTGGAGGCAGGGGAACTCCAGGTTATGCAGCACCTGAGCTTTGGATGCCCTTTCCCATAACTCCCAAGTGTGATGTTTATAGTTTTGGCATGCTGCTATTTGAAATCGTAGGCAGAAGAAGAAACATTGATATCAAACTTGCTGGAAGCCAAGAGTGGTTTCCAATATGGGTTTGGGAAAAATTTGATTCTGGACAACTGGGGGAGTTGATGATAGTGTGTGGGATAGAGGAGGAGAAAGCTAAGGAGATTGCAGAAAGAATGATTAAGATTGGTTTTTGGTGTGTTCAGTATAGGCCAGAATTAAGGCCCATAATGAGTGTTGTGGTGAAGATGCTGGAAGGTTCAGTGGAAATTCCAGAACCTGACAACCCGTTTCAGCACTTCATGGGTGGGGTTACCATTGCTCATCCAGTCCCAGTGTCACAAACCTATAATACAGCAAGTTTTTCATCTGGTTCTTCTGTTATGGTAACAAACTCCAGCATTGTATGTGGTACTCCTATTATGAGGAAGTACGACATTGAATTAGCCTCTACCAATGAATTACCAAATACAATCTTAACATGGCTGAGGATCATAGGATCTGCAACAAGCCCAATGCAGAGATACAGTTTTAGCGTTAAGATGTTGGTTCTGATTGTGTTCGTGATTCTCTGCCTGTTTTGTTTCTGTAAAGCATCCAAAAGAGAAACTGATGGCATGTCAGAAAGGAATTTTGTCCACATTGACAATATTTTGAGGAACATGGAAAGAGAAAAGCCAATGAGGTTTACAGGGGAGTTGCTTAGGATTGCAACAGATAATTACTCTATATCGTTGGGGTCAGGAGGTTTTGGAGAAGTTTACAAAGGAAATTTAAGTGATGGAACAACTGTGGCTGTGAAGGTTCTACGAGCAAATTCTTACAAGAGAATTGAGGAACAGTTCATGGCAGAAGTGGGTACAATTGGAAAAGTTCATCATTTCAACCTAGTTAAGTTGTATGGATTTTGCTTTGAAAAAGAGCTGAGAGCACTGGTTTATGAGTACATGAAGAATGGATCTCTTGACAAGTATCTGTTTCATGAAAACAAGACCCTTGGGTATGAAAAGCTTCATGAGATTGCAGTTGGAACAGCCAGAGGAATTTCATACTTGCATGAAGATTGTGAACAAAGAATAGTCCACTGTGACATCAAACCAGGAAATATTCTCTTGGACAACAACTTCAATCCTAAAGTTGCTGATTTTGGATTAGCTAAACTCTGCAACAGGGACCATACTCATATAACCATGACAGGAGGTAGGGGGACTCCTGGTTATGCCGCACCTGAGCTTTGGATGCCATTTCCTGTGACTCACAAGTGTGATGTTTACAGCTTTGGAATGCTGTTATTTGAAATCATAGGAAGGAGAAGAAACCTTGACATTAGCCTTCCCCAAAGTGAAGAGTGGTTTCCAGTATGGGCTTGGAAAAGATATGATGGTGGAGAATTGGAAGTGTTGATAAATGCTTGTAAGATTGAGGAGAGGTATAAGAAAATGGCTGAAAGAATGGTGAAGGTAGCTTTGTGTTGTGCTCAATATAGGCCAGAATCAAGGCCAATTATGAGTGATGTGGTGAAAATGTTGGAAGGTTCAGTAGAAATTTCTAAACCATCTAACCCGTTTCAGCATATCATAGGTGGAACTTTCCATTCTGTCCATGCATCTCGAACTGATGTTAATACAAGTATCAATTCCAGCTCTTCTTTTAAGATTAGTATTTTCTTTTGGGTATTGCCTGAATGCCTAAAAAGATATCGGGCTAATGGTGGTATTGGGTACTTTAAACAAAAAGGAAGACCAGATAAACAATTTATGACACTCACTATGGATAAATTTCTGAACGATATGGAAAGGGAGAAACCAATAAGGTTCACTGATCAGCAGCTAAGGATTGCAACTGATAATTACTCTTATCACTTGGGGTCAGGAGGTTTTGGGTCGGTTTACAAAGGAAGTTTTAGTAATGGAACCATTATAGCTGTTAAAGTTCTACTTGGGAGTTCTGACAAAAGAATTGATCAACAGTTTATGGCAGAAGTGGGTACCATTGGTAAAGTGCATCACTTCAATTTAGTTCGTCTATATGGGTTTTGCTTTGAAAGAAACCTGAGAGCACTGGTTTATGAGTACATGGTGAATGGCTCGCTTGAAAAGAGAAAAAACCATAACATCAACGTTCCAGAAAGTCAGGTTTGGTTTCCAATGTGGGCTTGGGAAAAATTTGGTGCTGGAGAAGTGGGGGAGTTGATAACTTCCTGTGGAATAGAGGACAAAGATAGGGAGATTGCAGAAAGAATTGTTAATGTAGCTTTGTCATGTGTTCAACACAGGCCAGAAGAAAGACCTATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCTTTTGAAGTTCCAAAGCCTCCAAACCCATTTCAATACCTGATTGGTTGGGTTCCACCCACTCATGATACTGACACAAATATCAGCACTGACTCTTCATCATTGGTAACCAAATCTGTCCCTGTTCTTGCCACTCATGGTACGACCTGCGAGATTGAATTAGCGTCTGCATAA 3279 0.401 MSSGAVIGAIIVVVGIFLKIGILICVCRKRNQKDDRSGVSGSKFLTRTMDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTVVAVKVLRGNSDKKIEEQFMAEVGTIGRIHHFNLVRLYGFCFEENLIALVYEYMSNGSLDRYLFHEKKTLGYEKLHEIAVGTARSIAYLHEECQHRIIHYDIKPGNILLDRNYNPKVADFGLAKLCNRDNTHITMSGGRGTPGYAAPELWMPFPITPKCDVYSFGMLLFEIVGRRRNIDIKLAGSQEWFPIWVWEKFDSGQLGELMIVCGIEEEKAKEIAERMIKIGFWCVQYRPELRPIMSVVVKMLEGSVEIPEPDNPFQHFMGGVTIAHPVPVSQTYNTASFSSGSSVMVTNSSIVCGTPIMRKYDIELASTNELPNTILTWLRIIGSATSPMQRYSFSVKMLVLIVFVILCLFCFCKASKRETDGMSERNFVHIDNILRNMEREKPMRFTGELLRIATDNYSISLGSGGFGEVYKGNLSDGTTVAVKVLRANSYKRIEEQFMAEVGTIGKVHHFNLVKLYGFCFEKELRALVYEYMKNGSLDKYLFHENKTLGYEKLHEIAVGTARGISYLHEDCEQRIVHCDIKPGNILLDNNFNPKVADFGLAKLCNRDHTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNLDISLPQSEEWFPVWAWKRYDGGELEVLINACKIEERYKKMAERMVKVALCCAQYRPESRPIMSDVVKMLEGSVEISKPSNPFQHIIGGTFHSVHASRTDVNTSINSSSSFKISIFFWVLPECLKRYRANGGIGYFKQKGRPDKQFMTLTMDKFLNDMEREKPIRFTDQQLRIATDNYSYHLGSGGFGSVYKGSFSNGTIIAVKVLLGSSDKRIDQQFMAEVGTIGKVHHFNLVRLYGFCFERNLRALVYEYMVNGSLEKRKNHNINVPESQVWFPMWAWEKFGAGEVGELITSCGIEDKDREIAERIVNVALSCVQHRPEERPIMSVVVKMLEGSFEVPKPPNPFQYLIGWVPPTHDTDTNISTDSSSLVTKSVPVLATHGTTCEIELASA* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03966 1092 SUPERFAMILY Protein kinase-like (PK-like) 54 346 IPR011009 -
Phac9g03966 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Phac9g03966 1092 Pfam Protein kinase domain 78 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03966 1092 FunFam serine/threonine-protein kinase PBS1-like 473 576 - -
Phac9g03966 1092 SMART serkin_6 500 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03966 1092 SMART serkin_6 74 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03966 1092 ProSiteProfiles Protein kinase domain profile. 500 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03966 1092 FunFam Putative receptor-like protein kinase 151 353 - -
Phac9g03966 1092 FunFam serine/threonine-protein kinase PBS1-like 45 150 - -
Phac9g03966 1092 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Phac9g03966 1092 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Phac9g03966 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Phac9g03966 1092 SUPERFAMILY Protein kinase-like (PK-like) 866 1065 IPR011009 -
Phac9g03966 1092 PANTHER OS07G0415500 PROTEIN 961 1046 - -
Phac9g03966 1092 Gene3D Phosphorylase Kinase; domain 1 48 150 - -
Phac9g03966 1092 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Phac9g03966 1092 Gene3D Phosphorylase Kinase; domain 1 850 950 - -
Phac9g03966 1092 Pfam Protein tyrosine and serine/threonine kinase 880 960 IPR001245 GO:0004672|GO:0006468
Phac9g03966 1092 Pfam Protein tyrosine and serine/threonine kinase 505 770 IPR001245 GO:0004672|GO:0006468
Phac9g03966 1092 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Phac9g03966 1092 FunFam serine/threonine-protein kinase PBS1-like 847 952 - -
Phac9g03966 1092 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03966 1092 ProSitePatterns Protein kinases ATP-binding region signature. 882 904 IPR017441 GO:0005524
Phac9g03966 1092 Gene3D Transferase(Phosphotransferase) domain 1 951 1046 - -
Phac9g03966 1092 ProSiteProfiles Protein kinase domain profile. 876 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03966 1092 Gene3D Transferase(Phosphotransferase) domain 1 151 354 - -
Phac9g03966 1092 Gene3D Transferase(Phosphotransferase) domain 1 577 783 - -
Phac9g03966 1092 SUPERFAMILY Protein kinase-like (PK-like) 482 771 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03966 Phac-Chr9 38114992 38122853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03966 865 968 Receptor kinase-like Gene Family AT5G38260 37.963 1.14e-15 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Phac9g03966 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03966 - - pvu:PHAVU_009G239500g 789.645