Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03953 ATGGCTGGGGACAAGGGAACCATCACTCTTGAAGAGATCAGGAATGAAACTGTTGATCTGGAACGCATTCCAATTGACGAAGTGTTTGAGCAATTGAAATGTACCAGGGAAGGTTTGTCCTCCACAGAAGGAGAGAACAGGCTTCAAATATTTGGACCCAACAAGCTAGAAGAAAAGAAGGAAAGCAAGTTTCTGAAATTTCTTGGGTTCATGTGGAATCCACTTTCATGGGTCATGGAGGCTGCAGCTATTATGGCAATTGCTCTTGCAAACGGAGAAGGGAAGCCTCCAGATTGGCAAGATTTTGTGGGTATTGTGTGCTTGTTGCTGATCAACTCCACTATCAGTTTCATTGAGGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAAACAAAGATTATGTCCCTATGTAACCTCAGGGAAGATGCCAAGAAGAAGGTCCATGCTATCATTGACAAGTTTGCAGAGAGAGGGCTTCGTTCACTTGCTGTTTCTAGACAGGAAGTTCCTGAGAAATCAAAAGAAAGTGCTGGTGCTCCATGGCAGTTTGTTGGTTTGTTGTCACTGTTTGATCCCCCTAGGCATGACAGTGCTGAAACCATTCGCCGAGCTCTTAACCTTGGTGTAAATGTTAAGATGATTACTGGTGATCAACTTGCCATAGCTAAGGAAACAGGAAGGAGACTTGGAATGGGAACAAATATGTATCCATCTGCTTCATTGCTTGGTCAAGACAAAGATGCAAGTATTGCAGCACTCCCTGTAGAAGAGCTGATTGAGAAGGCAGATGGATTTGCTGGTGTTTTTCCAGAGCACAAATATGAAATCGTAAAGAAGTTGCAGGAGAGGAAGCACATCTGTGGAATGACTGGAGATGGTGTCAATGACGCTCCTGCATTGAAGAAGGCTGACATTGGAATTGCTGTTGCCGATGCCACTGATGCTGCAAGAAGTGCTTCTGACATTGTTTTGACTGAACCTGGATTGAGTGTTATTATAAGTGCAGTCTTAACTAGCAGAGCTATTTTCCAAAGAATGAAGAACTATACGATATACGCAGTATCTATCACAATCCGTATAGTGTTTGGCTTCATGTTCATTGCACTGATCTGGAAATTTGACTTCTCCCCTTTTATGGTTTTGATTATTGCCATCCTGAATGATGGAACAATCATGACAATTTCAAAGGACAGGGTTAAGCCATCTCCCCTGCCTGATAGCTGGAAACTGAAAGAAATATTTGCTACTGGGATTGTGCTAGGAGGTTACTTGGCACTGATGACTGTTATATTCTTCTGGGCAATGAAAGAGACAAAGTTCTTCCATGATAAATTCGGAGTTAGACATATTGGTGACAGTCCAGATGAAATGACTGCTGCTTTGTATCTACAAGTCAGTATAGTTAGCCAGGCTTTGATATTTGTAACCCGTTCACGCAGCTGGTCCTTTGTTGAACGCCCTGGATTGTTGTTATTAGGCGCTTTTATTGCTACATTAATAGCAGTGTATGCAAACTGGAGCTTTGCAAGGATCAAAGGAGTTGGTTGGGGTTGGGCAGGAGTGATATGGCTCTACAGTATTGTCTTCTATTTCCCCCTTGACTTGATGAAGTTCGCCACCCGCTACATCTTGAGTGGCAAAGCTTGGTTGAACCTCCTAGAGAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAGCTCAATGGGCTCTTGCTCAGAGGACCCTTCATGGACTTCAACCACCAGAAGCTTCTAACATCTTCAATGAGAAGAGCAGTTACAGAGAACTGTCTGAGATTGCTGAGCAGGCCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAAGGTTTGGACATTGACACAATCCAGCAGCATTACACCGTGTAA 1968 0.4375 MAGDKGTITLEEIRNETVDLERIPIDEVFEQLKCTREGLSSTEGENRLQIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAGLAPKTKIMSLCNLREDAKKKVHAIIDKFAERGLRSLAVSRQEVPEKSKESAGAPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYLALMTVIFFWAMKETKFFHDKFGVRHIGDSPDEMTAALYLQVSIVSQALIFVTRSRSWSFVERPGLLLLGAFIATLIAVYANWSFARIKGVGWGWAGVIWLYSIVFYFPLDLMKFATRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASNIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03953 655 Gene3D - 604 655 - -
Phac9g03953 655 Gene3D - 198 334 IPR023214 -
Phac9g03953 655 PANTHER CALCIUM-TRANSPORTING ATPASE 140 587 - -
Phac9g03953 655 FunFam Plasma membrane ATPase 189 345 - -
Phac9g03953 655 Gene3D - 37 140 - -
Phac9g03953 655 SMART Cation_ATPase_N_a_2 19 91 IPR004014 -
Phac9g03953 655 SUPERFAMILY HAD-like 189 343 IPR036412 -
Phac9g03953 655 Gene3D - 69 123 - -
Phac9g03953 655 PRINTS P-type cation-transporting ATPase superfamily signature 192 203 - -
Phac9g03953 655 PRINTS P-type cation-transporting ATPase superfamily signature 297 316 - -
Phac9g03953 655 PRINTS P-type cation-transporting ATPase superfamily signature 214 224 - -
Phac9g03953 655 PRINTS P-type cation-transporting ATPase superfamily signature 320 332 - -
Phac9g03953 655 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 140 203 IPR023299 GO:0000166
Phac9g03953 655 FunFam ATPase 4 plasma membrane-type 282 519 - -
Phac9g03953 655 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 551 IPR023298 -
Phac9g03953 655 Gene3D - 335 519 - -
Phac9g03953 655 Coils Coil 606 626 - -
Phac9g03953 655 PRINTS H+-transporting ATPase (proton pump) signature 154 172 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03953 655 PRINTS H+-transporting ATPase (proton pump) signature 328 353 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03953 655 PRINTS H+-transporting ATPase (proton pump) signature 469 490 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03953 655 PRINTS H+-transporting ATPase (proton pump) signature 297 313 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03953 655 PRINTS H+-transporting ATPase (proton pump) signature 269 285 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03953 655 NCBIfam HAD-IC family P-type ATPase 272 386 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g03953 655 Pfam Cation transporter/ATPase, N-terminus 23 85 IPR004014 -
Phac9g03953 655 Gene3D - 141 197 IPR023299 GO:0000166
Phac9g03953 655 Pfam haloacid dehalogenase-like hydrolase 189 311 - -
Phac9g03953 655 FunFam Membrane H(+)-ATPase1 137 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03953 Phac-Chr9 38031743 38040567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03953 135 655 Primary Pumps ATPases AT2G24520 82.890 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03953 K01535 - gmx:100804422 953.74