Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g03905 | ATGCGGGATGCGGAGAATTTAAATAAGAAAGGATCTATAAAATCCTGTTGCTCAAAGGAACAGATTAAGTCCAAGCTATTATCATCAAAATTAAAAACAAGTAGCGCAAAACACCGAAAAAAGGAACACAAAGAGAAGTCAAGATCTCATAAATACAGAGTTGGTACGAACAGATCAAAGAAAAGAGTTGTTGATTCTTCTATCAAGGCACCACTTGAGGACTCTTCAAATAAAAAAGTGATTATTCGAAAAACTCTCCATAAAACTGATGGGAACTCTTCACGGATGGTGTCTTCAACAAAGCTACAAGGAAGAAAAAATCCTCATAGTTCTAGAAAAGAGGGCCATGGTGTTGATGAGGAGGCAAAAATTAAAAAACGTAAGAGCAGCAAAAAGAAGAATAGTCAAAGGGACAACATGGATCATGACGATGCTTCACGCCTTAAAAGGAGAACAAGATACCTCTTAATCAAAATGAAGTTGGAGCAAAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAAAGTCGGGAGAAGATTAGGCCGGAAAAGGAGTTACTAAGAGCAAAAAAGCAGATTTTAAATTGTAAACTTAGTATTCGAGATGTTATACGCCAACTGGATTCTCTTAGCTCTGTGGGTAGTATTGAAGATTCTGTCATTGCTCCAGACGGATCTGTTTATCATGAACATATATTCTGTGCCAATTGCAAACTACATGAAGCTTTCCCAGATAATGATATTATACTCTGTGATGGCACATGCAATCGTGCTTTTCACCAAAGATGTCTCAATCCTCCTTTGGATACTGAAAATATTCCTCCTGGAGATCAAGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATGGAAATAATAGAGTCAACAAATGCCCATCTTGGGACTCAATTTTCCTTGGACAGTAGTTGGCAGGATGTATTCAAGGAAGAGGCTGCTATGCCTGATGGTGATATTGCATTACTAAATCCAGAAGAAGAATGGCCATCAGATGATCCTGAAGATGATGATTACAACCCAGAGAGGAAAGAAGACAGCCACAGCATCAATACAGAAGGTGCTGATGAAAATTCATCCAATGATTCAACAAGTTCTTCGAGTTTGTGGCCTTTGAATGGAGAATGTCCTCCAGTAGATGAAGACCTTAGTCATGAATATTATTCTGTGAATAGTTTCATTGATTCTGATGAATCTGGGGAAATAGCATGTGGCCGTAGGCAGCGTAAAGCCGTTGACTACAAGAAACTGTACGATGAAATGTTTGGGAAGGATGCTCCACCTTGTGAACAAGTGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCGAAGAGAAAAGGAGTCTGATGCTGTTAATACTCTAATGACTCTGCATGAAAGTGAAAATAAATATCCCAATAATGAGAGCAATGATAGAATAAGAGAGGGTTCTTCAGGCTTACAAATAAGAAGATCTTGTTTCAGAATTCCACTTGATGCAGTTGAGAAACTTCGCCAAGTTTTTGCAGAGAACGAGCTTCCTCCTAGATCCGTGAAGGAAGGTCTTTCAAAAGAGTTGGGACTAGATCCTGAAAAGCAAATGGTTCAAAAATGCACGTTACCTGGCACTTAA | 1635 | 0.3908 | MRDAENLNKKGSIKSCCSKEQIKSKLLSSKLKTSSAKHRKKEHKEKSRSHKYRVGTNRSKKRVVDSSIKAPLEDSSNKKVIIRKTLHKTDGNSSRMVSSTKLQGRKNPHSSRKEGHGVDEEAKIKKRKSSKKKNSQRDNMDHDDASRLKRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELLRAKKQILNCKLSIRDVIRQLDSLSSVGSIEDSVIAPDGSVYHEHIFCANCKLHEAFPDNDIILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCKFCECKMEIIESTNAHLGTQFSLDSSWQDVFKEEAAMPDGDIALLNPEEEWPSDDPEDDDYNPERKEDSHSINTEGADENSSNDSTSSSSLWPLNGECPPVDEDLSHEYYSVNSFIDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPGKRKRREKESDAVNTLMTLHESENKYPNNESNDRIREGSSGLQIRRSCFRIPLDAVEKLRQVFAENELPPRSVKEGLSKELGLDPEKQMVQKCTLPGT* | 545 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g03905 | 544 | ProSiteProfiles | Zinc finger PHD-type profile. | 233 | 290 | IPR019787 | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 359 | 378 | - | - | |
Phac9g03905 | 544 | SUPERFAMILY | FYVE/PHD zinc finger | 227 | 293 | IPR011011 | - | |
Phac9g03905 | 544 | PANTHER | POLYCOMB-LIKE TRANSCRIPTION FACTOR | 22 | 533 | - | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 332 | 346 | - | - | |
Phac9g03905 | 544 | Pfam | PHD-finger | 235 | 290 | IPR019787 | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 32 | 57 | - | - | |
Phac9g03905 | 544 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 227 | 284 | IPR013083 | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 429 | 460 | - | - | |
Phac9g03905 | 544 | FunFam | pathogenesis-related homeodomain protein-like | 227 | 287 | - | - | |
Phac9g03905 | 544 | SMART | PHD_3 | 235 | 288 | IPR001965 | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 521 | 544 | - | - | |
Phac9g03905 | 544 | CDD | PHD_PRHA_like | 235 | 287 | IPR045876 | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 25 | 146 | - | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 91 | 105 | - | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 107 | 126 | - | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 329 | 382 | - | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 429 | 484 | - | - | |
Phac9g03905 | 544 | ProSitePatterns | Zinc finger PHD-type signature. | 236 | 287 | IPR019786 | - | |
Phac9g03905 | 544 | MobiDBLite | consensus disorder prediction | 76 | 90 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g03905 | Phac-Chr9 | 37702494 | 37708806 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g03905 | 136 | 533 | Homeobox Transcription Factor Family | AT4G29940 | 58.231 | 2.51e-146 | 437 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Phac9g03905 | PHD | 6.2e-11 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g03905 | - | - | gmx:100816912 | 880.937 |