Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03885 ATGTTATATATAAATCTGGGAGATATCTCTGCTGAGCTACCCTTCAGCCGTTGCAAGCAGCACAACATCGAGATGGGCGAAGGGGAAGCAAAAGCCATTGTTCCGGAATCGGTGTTGAAGAAGGAGAAAAGGAATGAGGAGTGGGCTTTGGCCAAAAAGCAGAACCTGGAAGCAGCAAAGAAAAAGAGGTTTGAAACGCGGAAATTGATTTTTAGCAGAGCCAAACAGTACGCAAAGGAATACGAGGAGCAGCAAAAGGAACTAATTAGGTTGAAGCGTGAAGCCAAGCTTAAGGGAGGGTTTTATGTCGACCCCGAAACAAAGCTCTTGTTCATCATCAGGATTCGTGGTATCAATGCCATGGATCCCAAAACAAGGAAGATTCTGCAGCTTCTCCGTTTGAGACAGATTTTTAATGGCGTCTTTCTTAAAGTCAACAAAGCAACCTTGAATATGCTGCATAGGGTAGAGCCTTATGTTACCTACGGGTACCCTAATTTGAAGAGTGTAAAAGAATTGATCTACAAGAGGGGCTTTGGAAAAGTCAACAAGCAGAGAATTGCTCTGACTGACAATTCTATTATTGAACAGACTTTGGGGAAGCATGAGATCATTTGCATTGAAGATCTGATCCATGAGATCATGACTGTTGGACCTCACTTCAAGGAGGCAAACAATTTTCTATGGCCTTTCAAGCTCAAAGCTCCCCTTGGTGGTTTGGAGAAGAAAAGAAATCACTATGTTGAAGGAGGTGACGCTGGCAACAGGGAAGATTACATAAACGAGCTTATTAGAAGGATGAATTAG 807 0.4287 MLYINLGDISAELPFSRCKQHNIEMGEGEAKAIVPESVLKKEKRNEEWALAKKQNLEAAKKKRFETRKLIFSRAKQYAKEYEEQQKELIRLKREAKLKGGFYVDPETKLLFIIRIRGINAMDPKTRKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKVNKQRIALTDNSIIEQTLGKHEIICIEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLEKKRNHYVEGGDAGNREDYINELIRRMN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03885 268 PANTHER 60S RIBOSOMAL PROTEIN L7 32 268 IPR039699 -
Phac9g03885 268 Gene3D - 214 268 IPR036919 -
Phac9g03885 268 Gene3D - 109 213 IPR036919 -
Phac9g03885 268 CDD Ribosomal_L7_archeal_euk 109 268 IPR035808 -
Phac9g03885 268 Pfam Ribosomal protein L30p/L7e 110 160 IPR016082 -
Phac9g03885 268 FunFam 60S ribosomal protein L7 214 268 - -
Phac9g03885 268 SUPERFAMILY Ribosomal protein L30p/L7e 109 268 IPR036919 -
Phac9g03885 268 FunFam 60S ribosomal protein L7 109 213 - -
Phac9g03885 268 ProSitePatterns Ribosomal protein L30 signature. 128 160 IPR018038 -
Phac9g03885 268 Coils Coil 74 98 - -
Phac9g03885 268 NCBIfam 60S ribosomal protein uL30 35 268 IPR005998 GO:0000463|GO:0003735|GO:0022625
Phac9g03885 268 Pfam Ribosomal L30 N-terminal domain 34 105 IPR012988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03885 Phac-Chr9 37522752 37525624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03885 25 268 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 84.426 2.27e-155 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03885 K02937 - gmx:100500011 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g03885 9 37522752 37525624 Phac9g03885 9 37522752 37525624 ECH