LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac9g03876	ATGGCACTGGATATGCTCGATCTTCTTCCCAGAACAAGGATGGAGGAACAGTTAGCAATTCAAGAAGCTGCTTCGGCTGGTTTGAAAAGCATGGAGCATCTCATTCGACTCCTTTCTCCCTCTGCCTGCAACTCTTCTTCTTTTTCTTCTTCTAACAACAACAACAACGTTAGCCTCAACAACCTTGACTGCTCCGAAATCACCGACTTCACCGTCTCCAAGTTCAAACAAGTCATTAACCTTCTCAACCGCACCGGCCACGCCCGCTTCCGCCGTGCACCCACCCAAGCCCAGGCCCAGGCCCAGCCGCAACCAGAGCCACAACCACAACCACAACCTCAATCCCAACAAGGCTTTACTTTGGATTTCGTTAAACCCACCATTCTCAACTCTAAGCCCTGCAACAAAGACGAAACCCTCACTCTTTCCACCACCACCACCACCTCCTCTTCCTTCTTATCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCCTCCGCCGCCAAACCCCCTCTCTGCTCCTCCCACAGGAAAAAGTGCCGCGACGCCGCGCTGTCCGCCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAAAAAACGATCCGCGTCCCGGCGATAAGTTCCAAGATCGCCGACATCCCACCGGACGAGTACTCGTGGAGAAAGTACGGCCAGAAACCGATCAAGGGTTCACCTTTTCCTCGTGGGTACTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGCGCGCAAGATGACCCGAAGATGCTGATAGTGACGTACGAGGGCGAGCACCATCACGCGCTGCCGTTACCTGCCGCAACCGGCGTTGGTTTCGGCCTCTGA	897	0.5563	MALDMLDLLPRTRMEEQLAIQEAASAGLKSMEHLIRLLSPSACNSSSFSSSNNNNNVSLNNLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPTQAQAQAQPQPEPQPQPQPQSQQGFTLDFVKPTILNSKPCNKDETLTLSTTTTTSSSFLSSVTNDASVSDGKIGPFLPPSAAKPPLCSSHRKKCRDAALSAKPSCHCSKKRKSRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHHHALPLPAATGVGFGL*	299

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac9g03876	298	Gene3D	WRKY domain	216	288	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Phac9g03876	298	Pfam	Plant zinc cluster domain	181	224	IPR018872	-
	Phac9g03876	298	MobiDBLite	consensus disorder prediction	91	117	-	-
	Phac9g03876	298	SMART	WRKY_cls	226	286	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phac9g03876	298	SUPERFAMILY	WRKY DNA-binding domain	224	287	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Phac9g03876	298	ProSiteProfiles	WRKY domain profile.	221	287	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phac9g03876	298	FunFam	WRKY transcription factor 65	210	287	-	-
	Phac9g03876	298	Pfam	WRKY DNA -binding domain	228	284	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Phac9g03876	298	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	17	286	IPR044810	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac9g03876	Phac-Chr9	37419333	37421439	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac9g03876	6	297	WRKY Transcription Factor Family	AT2G24570	50.000	4.33e-93	277

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Phac9g03876		WRKY	2.1e-26	CL0274