Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03870 ATGGAAGATGATGAGCCATGCATCACCACTCTAAGCCTTGGACTAGGAATGGGAGGCCATGTGCCAAAGAAGGACAAGCAGAAGCAGAAGCTCCCTTCCTTGGACCTGACGTTTGATATTTGTCCAAGGAGAGAGCAAATGATTCACGTGGATCAACAACAACTTCATGATGATAAGGCAAAAGGGTTGTTATGTTTGAAACACCCCAATGAAAATAACAGCCCTGAAAGCAGCAACAACAGCAATAACGGCACCAGAAAGAAACTGAAGCTTACAAAGGAGCAATCAGCCACCCTTGAGGATATTTTCAAGCTGCATACCACTCTTAACCCTGCACAGAAGCAGGCACTTGCTGAGAAATTGAATTTGAAGCATAGACAGGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGTTTCTTAAACTTTATGATCCTTTAATGAGTTTCAATTTCTGGGGGTGTTCAGTTTTGGTTCTATGGTTCTATCTCATTGTAGCCTTTAAAATTTCTCTCTTATCTTCTGTTCTCTGTCATGTTTAG 540 0.4167 MEDDEPCITTLSLGLGMGGHVPKKDKQKQKLPSLDLTFDICPRREQMIHVDQQQLHDDKAKGLLCLKHPNENNSPESSNNSNNGTRKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEKLNLKHRQVEVWFQNRRARFLKLYDPLMSFNFWGCSVLVLWFYLIVAFKISLLSSVLCHV* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03870 179 SUPERFAMILY Homeodomain-like 71 139 IPR009057 -
Phac9g03870 179 SMART HOX_1 84 146 IPR001356 GO:0003677
Phac9g03870 179 MobiDBLite consensus disorder prediction 70 86 - -
Phac9g03870 179 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 139 - -
Phac9g03870 179 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Phac9g03870 179 MobiDBLite consensus disorder prediction 65 87 - -
Phac9g03870 179 CDD homeodomain 86 141 IPR001356 GO:0003677
Phac9g03870 179 Gene3D - 64 141 - -
Phac9g03870 179 Pfam Homeodomain 86 138 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03870 Phac-Chr9 37366826 37368367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03870 74 167 Homeobox Transcription Factor Family AT5G06710 52.525 1.91e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac9g03870 Homeodomain 7.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03870 K09338 - gmx:100778922 209.534