Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03869 ATGGAAGATGATGAGCCATGCATCACCACTCTAAGCCTTGGACTAGGAATGGGAGGCCATGTGCCAAAGAAGGACAAGCAGAAGCAGAAGCTCCCTTCCTTGGACCTGACGTTTGATATTTGTCCAAGGAGAGAGCAAATGATTCACGTGGATCAACAACAACTTCATGATGATAAGGCAAAAGGGTTGTTATGTTTGAAACACCCCAATGAAAATAACAGCCCTGAAAGCAGCAACAACAGCAATAACGGCACCAGAAAGAAACTGAAGCTTACAAAGGAGCAATCAGCCACCCTTGAGGATATTTTCAAGCTGCATACCACTCTTAACCCTGCACAGAAGCAGGCACTTGCTGAGAAATTGAATTTGAAGCATAGACAGGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGCTGAAGCAAACAGAGGTGGATTGCGAGTTCCTGAAGAAATGCTGTGAGAAACTAACCGATGAGAATCTGAGACTGAAGAAGGAATTGCAAGAGCTGCGTGCACAAAAGATTGGACCAAAACCATTGTACATTCAACTCTCCAAGGCCACAACTCTGAGCATTTGTTCATCGTGTGAGAAAGAATTGAAGCCTAATGAAGGGAAGAAAGGGGGCATTACCGATGTGGTCCGAAACAGCAGCCAGAAATTGCAGAACAGTGTAGGTGTAAAGGGCATTTAG 699 0.4464 MEDDEPCITTLSLGLGMGGHVPKKDKQKQKLPSLDLTFDICPRREQMIHVDQQQLHDDKAKGLLCLKHPNENNSPESSNNSNNGTRKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEKLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCEKLTDENLRLKKELQELRAQKIGPKPLYIQLSKATTLSICSSCEKELKPNEGKKGGITDVVRNSSQKLQNSVGVKGI* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03869 232 CDD homeodomain 86 143 IPR001356 GO:0003677
Phac9g03869 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 204 - -
Phac9g03869 232 SMART halz 142 185 IPR003106 GO:0006355|GO:0043565
Phac9g03869 232 MobiDBLite consensus disorder prediction 70 86 - -
Phac9g03869 232 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Phac9g03869 232 SUPERFAMILY Homeodomain-like 71 143 IPR009057 -
Phac9g03869 232 Gene3D - 64 141 - -
Phac9g03869 232 SMART HOX_1 84 146 IPR001356 GO:0003677
Phac9g03869 232 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Phac9g03869 232 Pfam Homeodomain 86 140 IPR001356 GO:0003677
Phac9g03869 232 Pfam Homeobox associated leucine zipper 142 175 IPR003106 GO:0006355|GO:0043565
Phac9g03869 232 Coils Coil 141 175 - -
Phac9g03869 232 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03869 Phac-Chr9 37366826 37368367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03869 76 200 Homeobox Transcription Factor Family AT3G60390 64.000 2.96e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac9g03869 Homeodomain 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03869 - K09338 gmx:100790522 352.443