Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03868 ATGACAGTTACAACTACAGAGAAGCAAGGGATTAGGAAACACAATGAATCAGCAGATATGATGAAGATGATATTTTCATCTAATCCACAGTCAGGGTCCATGGAGTTCTTTAGTGGGAACCTTAGGACAATTAACTGCTTTGACTACCAGACACTGAAAATTGCAACCACGAATTTCCATGCTGATAATTTTCTTGGAAGTGGTGGATTTGGACCTGTTTACAAGGGAAAGTTGGTAGATGGAAGGCTAGTTGCAGTTAAGAAATTGTCTCTGAACAAATCCCAGCAGGGAGAAAAAGAGTTTCTGGCAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGCTGCATAGATGGGCCACAAAGGATACTTGTCTATGAATACATGAAAAACAGAAGTTTGGACCTCTTTATACATGAAAACAGTGATCAATTTCTGAAATGGGGAACCAGATTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCACGAGGATTCACACCAAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGCTTCAGCCAAGGATTGGGGACTTTGGGCTAGCTAGATTTTTCCCCGAAGACCAAGCTTACCTTAGCACACAGTTCGCTGGAACACTAGGTTATACTGCTCCTGAATATGCCATTAGAGGGGAATTATCAGAAAAGGCTGATATCTATAGTTTTGGAGTACTCTTGCTTGAAATAATCTGTTGCAGGAAAAACACAGACCACAATTTGCCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATCGTAGATCCGAAGCTGCGACAAGATGGATTCGTAGAAAAGGATGTTATGCAAGCAATCCACGTGGCTTTCTTATGTCTTCAACCTGATCCACATTTGAGGCCTCCCATGTCAGAGATTGTGGCATTGTTGACTTTCAAAATTGAAATGGTGACAACACCAATGAGGCCAGCCTTTCTATATCAAAGACCAAGAAAGGATGATGAAAACCATTGTTTGAGAGGATTATCTGAGGGTTTAACATCTCCCATATGA 1113 0.4124 MTVTTTEKQGIRKHNESADMMKMIFSSNPQSGSMEFFSGNLRTINCFDYQTLKIATTNFHADNFLGSGGFGPVYKGKLVDGRLVAVKKLSLNKSQQGEKEFLAEVRTITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDLFIHENSDQFLKWGTRFQIILGVARGLQYLHEDSHQRIVHRDIKASNILLDDKLQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTDHNLPSEMQYLPEYAWKLYENARILDIVDPKLRQDGFVEKDVMQAIHVAFLCLQPDPHLRPPMSEIVALLTFKIEMVTTPMRPAFLYQRPRKDDENHCLRGLSEGLTSPI* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03868 370 FunFam Cysteine-rich receptor-like protein kinase 10 23 135 - -
Phac9g03868 370 ProSiteProfiles Protein kinase domain profile. 59 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03868 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Phac9g03868 370 SUPERFAMILY Protein kinase-like (PK-like) 37 333 IPR011009 -
Phac9g03868 370 CDD STKc_IRAK 65 331 - -
Phac9g03868 370 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Phac9g03868 370 Pfam Protein tyrosine and serine/threonine kinase 62 329 IPR001245 GO:0004672|GO:0006468
Phac9g03868 370 Gene3D Transferase(Phosphotransferase) domain 1 136 339 - -
Phac9g03868 370 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 136 340 - -
Phac9g03868 370 SMART serkin_6 59 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03868 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03868 Phac-Chr9 37353617 37357453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03868 47 346 Receptor kinase-like Gene Family AT1G56120 49.667 9.87e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac9g03868 PK_Tyr_Ser-Thr 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03868 - - gmx:100799624 664.07