Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03867 ATGACTCTCCGAGTACTCCAAGAAGCTTCACCCTCTAATAAGACAACACAACACAAATCTGGAGCATTGTTTTACATCCTGGGAGGAATTGTTGTGCTGGCCATCGTGTTGATTTTTTTATATGTATTTCGGAAGCGTATAAAACGGCAACCACAGAATATGACAGTTACAACTACAGAGAAGCAAGGGATTAGGAAACACAATGAATCAGCAGATATGATGAAGATGATATTTTCATCTAATCCACAGTCAGGGTCCATGGAGTTCTTTAGTGGGAACCTTAGGACAATTAACTGCTTTGACTACCAGACACTGAAAATTGCAACCACGAATTTCCATGCTGATAATTTTCTTGGAAGTGGTGGATTTGGACCTGTTTACAAGGGAAAGTTGGTAGATGGAAGGCTAGTTGCAGTTAAGAAATTGTCTCTGAACAAATCCCAGCAGGGAGAAAAAGAGTTTCTGGCAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTTGGATGCTGCATAGATGGGCCACAAAGGATACTTGTCTATGAATACATGAAAAACAGAAGTTTGGACCTCTTTATACATGAAAACAGTGATCAATTTCTGAAATGGGGAACCAGATTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCACGAGGATTCACACCAAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAGCTTCAGCCAAGGATTGGGGACTTTGGGCTAGCTAGATTTTTCCCCGAAGACCAAGCTTACCTTAGCACACAGTTCGCTGGAACACTAGGTTATACTGCTCCTGAATATGCCATTAGAGGGGAATTATCAGAAAAGGCTGATATCTATAGTTTTGGAGTACTCTTGCTTGAAATAATCTGTTGCAGGAAAAACACAGACCACAATTTGCCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATCGTAGATCCGAAGCTGCGACAAGATGGATTCGTAGAAAAGGATGTTATGCAAGCAATCCACGTGGCTTTCTTATGTCTTCAACCTGATCCACATTTGAGGCCTCCCATGTCAGAGATTGTGGCATTGTTGACTTTCAAAATTGAAATGGTGACAACACCAATGAGGCCAGCCTTTCTATATCAAAGACCAAGAAAGGATGATGAAAACCATTGTTTGAGAGGATTATCTGAGGGTTTAACATCTCCCATATGA 1272 0.4119 MTLRVLQEASPSNKTTQHKSGALFYILGGIVVLAIVLIFLYVFRKRIKRQPQNMTVTTTEKQGIRKHNESADMMKMIFSSNPQSGSMEFFSGNLRTINCFDYQTLKIATTNFHADNFLGSGGFGPVYKGKLVDGRLVAVKKLSLNKSQQGEKEFLAEVRTITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDLFIHENSDQFLKWGTRFQIILGVARGLQYLHEDSHQRIVHRDIKASNILLDDKLQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTDHNLPSEMQYLPEYAWKLYENARILDIVDPKLRQDGFVEKDVMQAIHVAFLCLQPDPHLRPPMSEIVALLTFKIEMVTTPMRPAFLYQRPRKDDENHCLRGLSEGLTSPI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03867 423 Gene3D Transferase(Phosphotransferase) domain 1 189 392 - -
Phac9g03867 423 Pfam Protein tyrosine and serine/threonine kinase 115 382 IPR001245 GO:0004672|GO:0006468
Phac9g03867 423 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 189 393 - -
Phac9g03867 423 SMART serkin_6 112 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03867 423 Gene3D Phosphorylase Kinase; domain 1 84 188 - -
Phac9g03867 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Phac9g03867 423 SUPERFAMILY Protein kinase-like (PK-like) 90 386 IPR011009 -
Phac9g03867 423 ProSiteProfiles Protein kinase domain profile. 112 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03867 423 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 406 - -
Phac9g03867 423 FunFam Cysteine-rich receptor-like protein kinase 10 76 188 - -
Phac9g03867 423 CDD STKc_IRAK 118 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03867 Phac-Chr9 37352879 37357453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03867 100 399 Receptor kinase-like Gene Family AT1G56120 49.667 3.15e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac9g03867 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03867 - - gmx:100799624 727.243