Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03838 ATGCACCCCATGGAAAATCTCTTCTCTCTTCCTGTACCCGCCAGGGCTGATATTATCCAATTTCTGGTGCAGTCTTTTGGCTGCAGTTACATTTGTCTCTGGGCATATGATTCCATTTCACCCAATCGTTTGTGCTTCTTGGATGGTATCTACAATGTAACAAACGACCAACCAGGCTCTAGTTTGGGGACTGTGGCACAACAACTTTTCAGTCAGTTCCGGACACTAACATTTGATGTTAACGATGACCGTGTTCCTGGACTAGCCTTTAGGAACCAGCGTCCCTACCTAGAGTTGCAACGATTGGAACTTCTAAGACTTGCATCAACAGAAATACAAACACAATTCTTTCAGGAGGCAAGGATTAAGACTGCTGTTTTCATGGGGTGTAACAAAGGAGAAATTGAGCTTGGTTTCTTAAACATGTCCCAGGTTGACATTCAAACAGCACTGAGGAGTTTGTTTCCTGGAGATTTTTCTGGTGGACAGGCCCAGAATATTGATCAAAACCCTCCCACATCATCTTCATCTTCTTTGAGATCAATATCCACAGGTAGCCCTGAATACTCATCTCTTCTGTTCAGTATTCCAGGCAGTTCTCAACCCCACTTTCCTGAGACACTTGGAGGAGCAACAATGTCCCCAATGCCAAACACAGCCATTCAAGCATTGGCACAAGGCCCTCTAACAACACAAAGTGAACATGATGCAATGATGAGAGCAATGCTCCATGTTATATCTCCAACTTCTCATCACCACCAAAACTTCCATCCAGACACCAGTGCTTTCCAGAGTTACAGATCAGACATTGCTCCCAACATGGCTCCCAATATCAGAAGGCAAAGCCTCATGAAGAGATCTTTTGCATTCTTTGGAAACTTAAATTTTATGAGAATTAGAGAACGCATTCAAGCAACGTCCCGTCCCACAAATACCCAGCTGCATCATATGATATCAGAGAGAAGAAGGCGTGAGAAACTAAACGAGAATTTCCAAGCACTCAGAGCACTACTTCCTCCAGGAACTAAGAAAGATAAAGCGTCTATACTAATAGCAGCAAAGGACACATTGAGTTCTCTAATGGCTGAAGTTGATGAACTAAGCAAAAGGAATGAGGGATTGACATCACTTTTGCCATCCAAAGAACCTACAACTGAAGAAACCAGGGTTAGATTATCTCCAAGTGAAAGACTAGGTGTCCGAGTTTCACATGTACCCGAATCAAGCTCGTCACAGGATCGAATGGTGGAGTTGCAAGTGAATGTGAGAGGACAAGTTTCTCAAATTGATTTGTCAATCTGCTTATTGGAATTCTTAAAACGGTGTCTCAACGTGAGCTTGGTTTCCATGGACGCAAACACCCACATTGCACAAGGGAATAATGATCTTCATCAACTAACCTTCAGATTAAGGATTATTCAGTGGGTGGCGCAAGACAAGTCTATCTCTGCATTATGA 1458 0.4307 MHPMENLFSLPVPARADIIQFLVQSFGCSYICLWAYDSISPNRLCFLDGIYNVTNDQPGSSLGTVAQQLFSQFRTLTFDVNDDRVPGLAFRNQRPYLELQRLELLRLASTEIQTQFFQEARIKTAVFMGCNKGEIELGFLNMSQVDIQTALRSLFPGDFSGGQAQNIDQNPPTSSSSSLRSISTGSPEYSSLLFSIPGSSQPHFPETLGGATMSPMPNTAIQALAQGPLTTQSEHDAMMRAMLHVISPTSHHHQNFHPDTSAFQSYRSDIAPNMAPNIRRQSLMKRSFAFFGNLNFMRIRERIQATSRPTNTQLHHMISERRRREKLNENFQALRALLPPGTKKDKASILIAAKDTLSSLMAEVDELSKRNEGLTSLLPSKEPTTEETRVRLSPSERLGVRVSHVPESSSSQDRMVELQVNVRGQVSQIDLSICLLEFLKRCLNVSLVSMDANTHIAQGNNDLHQLTFRLRIIQWVAQDKSISAL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03838 485 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 311 360 IPR011598 GO:0046983
Phac9g03838 485 Coils Coil 350 377 - -
Phac9g03838 485 Pfam Helix-loop-helix DNA-binding domain 315 360 IPR011598 GO:0046983
Phac9g03838 485 CDD bHLH_AtbHLH_like 316 368 IPR045239 -
Phac9g03838 485 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 108 473 IPR044658 -
Phac9g03838 485 SMART finulus 317 366 IPR011598 GO:0046983
Phac9g03838 485 MobiDBLite consensus disorder prediction 161 184 - -
Phac9g03838 485 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 375 IPR036638 GO:0046983
Phac9g03838 485 Gene3D - 310 383 IPR036638 GO:0046983
Phac9g03838 485 Coils Coil 317 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03838 Phac-Chr9 37102544 37107140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03838 15 472 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 40.040 7.36e-86 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g03838 HLH 6.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03838 - - gmx:100807098 716.457