Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03834 ATGGGGTGTAACAAAGGAGAAATTGAGCTTGGTTTCTTAAACATGTCCCAGGTTGACATTCAAACAGCACTGAGGAGTTTGTTTCCTGGAGATTTTTCTGGTGGACAGGCCCAGAATATTGATCAAAACCCTCCCACATCATCTTCATCTTCTTTGAGATCAATATCCACAGGTAGCCCTGAATACTCATCTCTTCTGTTCAGTATTCCAGGCAGTTCTCAACCCCACTTTCCTGAGACACTTGGAGGAGCAACAATGTCCCCAATGCCAAACACAGCCATTCAAGCATTGGCACAAGGCCCTCTAACAACACAAAGTGAACATGATGCAATGATGAGAGCAATGCTCCATGTTATATCTCCAACTTCTCATCACCACCAAAACTTCCATCCAGACACCAGTGCTTTCCAGAGTTACAGATCAGACATTGCTCCCAACATGGCTCCCAATATCAGAAGGCAAAGCCTCATGAAGAGATCTTTTGCATTCTTTGGAAACTTAAATTTTATGAGAATTAGAGAACGCATTCAAGCAACGTCCCGTCCCACAAATACCCAGCTGCATCATATGATATCAGAGAGAAGAAGGCGTGAGAAACTAAACGAGAATTTCCAAGCACTCAGAGCACTACTTCCTCCAGGAACTAAGAAAGATAAAGCGTCTATACTAATAGCAGCAAAGGACACATTGAGTTCTCTAATGGCTGAAGTTGATGAACTAAGCAAAAGGAATGAGGGATTGACATCACTTTTGCCATCCAAAGAACCTACAACTGAAGAAACCAGGGTTAGATTATCTCCAAGTGAAAGACTAGGTGTCCGAGTTTCACATGTACCCGAATCAAGCTCGTCACAGGATCGAATGGTGGAGTTGCAAGTGAATGTGAGAGGACAAGTTTCTCAAATTGATTTGTCAATCTGCTTATTGGAATTCTTAAAACGGTGTCTCAACGTGAGCTTGGTTTCCATGGACGCAAACACCCACATTGCACAAGGGAATAATGATCTTCATCAACTAACCTTCAGATTAAGGATTATTCAGGGAAGTGAATGGGACGAGTGTGGGTTCGAGGAAGCAGTGAGAAGAGTGGTTGGTGAGTTGGCACAGTACAAAGAGGACCAATAG 1125 0.4311 MGCNKGEIELGFLNMSQVDIQTALRSLFPGDFSGGQAQNIDQNPPTSSSSSLRSISTGSPEYSSLLFSIPGSSQPHFPETLGGATMSPMPNTAIQALAQGPLTTQSEHDAMMRAMLHVISPTSHHHQNFHPDTSAFQSYRSDIAPNMAPNIRRQSLMKRSFAFFGNLNFMRIRERIQATSRPTNTQLHHMISERRRREKLNENFQALRALLPPGTKKDKASILIAAKDTLSSLMAEVDELSKRNEGLTSLLPSKEPTTEETRVRLSPSERLGVRVSHVPESSSSQDRMVELQVNVRGQVSQIDLSICLLEFLKRCLNVSLVSMDANTHIAQGNNDLHQLTFRLRIIQGSEWDECGFEEAVRRVVGELAQYKEDQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03834 374 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Phac9g03834 374 Gene3D - 183 256 IPR036638 GO:0046983
Phac9g03834 374 Coils Coil 223 250 - -
Phac9g03834 374 SMART finulus 190 239 IPR011598 GO:0046983
Phac9g03834 374 Coils Coil 190 210 - -
Phac9g03834 374 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 248 IPR036638 GO:0046983
Phac9g03834 374 Pfam Helix-loop-helix DNA-binding domain 188 233 IPR011598 GO:0046983
Phac9g03834 374 MobiDBLite consensus disorder prediction 33 57 - -
Phac9g03834 374 CDD bHLH_AtbHLH_like 189 241 IPR045239 -
Phac9g03834 374 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 25 364 IPR044658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03834 Phac-Chr9 37101756 37107140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03834 1 368 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 41.032 4.97e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g03834 HLH 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03834 - - gmx:100807098 547.354