Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03788 ATGCTCACGTGCATAGCACGGCCCAAGAAACTCGACTCGGCCACCGACGATCCGAGTTCGCGCGGCGCCAAATCGCTAACATGTCAGCTGAAGGAGATGGCGCTGAAGGCGTCGGGGTCGTACAAGCAGTGCGGTCCGTGCGCGCCCTCGCAGAGTCGGCTGAGTCGCGGCGGCGAGTCCGATTCGGAGTCGTCGCGGCGGCGGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATATCGAGCGGCGAGGGGACGCCGAGCTCCAGCGGGAGGAGGACGATGGTGGTGCTGGAAGAGGAGGCGGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCCGGGGTTCTGATCACGTTCGTGTCGCTTCCGCGTGGCGGGAACCATCTCAAACGGATTCGGTTCAGTCGCGATGTGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCGAAGCGTGAATCAATAGAAGAGATCCCTGTGACACCTCCCCTGAGCAGGGAAAGGCCACCTTGTAATTTATTCCGTGGAGGAGGAGGAGGAGGGGTGGCAATTGGGTACTCATCCTCTGATTCGTTTGATCATCAGTCAATGCAATCCCGGCATTACTATGATCCAAGTGGTGTGAACTCAGCCCCGAAGGTGTCCACCATTAGTGCTGCTGCCAAGACAGATATCTCATCAATGGATGCTGATGCTTCTATTAGAAGTAGCTCATCTAGAGAAGAAGCTGATCGCTCTGGCGATCTATCAATCAGTAATGCCAGTGACCTAGACGCTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTCCCAGGTGGCAAAAGGGAGCTCAAACGAGTAAGGTTCAGTCGAGAAAAGTTTGGGGAGATGTATGCCAGATTGTGGTGGGAAGAGAACCGTACCAGAATACATGAACAGTACTTGTGA 1041 0.5495 MLTCIARPKKLDSATDDPSSRGAKSLTCQLKEMALKASGSYKQCGPCAPSQSRLSRGGESDSESSRRRWGKEMEARLKGISSGEGTPSSSGRRTMVVLEEEAEPKEWVAQVEPGVLITFVSLPRGGNHLKRIRFSRDVFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEEIPVTPPLSRERPPCNLFRGGGGGGVAIGYSSSDSFDHQSMQSRHYYDPSGVNSAPKVSTISAAAKTDISSMDADASIRSSSSREEADRSGDLSISNASDLDAEWVEQDEPGVYITIRALPGGKRELKRVRFSREKFGEMYARLWWEENRTRIHEQYL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03788 346 Pfam Transcription factor BRX N-terminal domain 24 47 IPR027988 -
Phac9g03788 346 MobiDBLite consensus disorder prediction 259 283 - -
Phac9g03788 346 MobiDBLite consensus disorder prediction 170 202 - -
Phac9g03788 346 MobiDBLite consensus disorder prediction 59 78 - -
Phac9g03788 346 ProSiteProfiles BRX domain profile. 291 346 IPR013591 -
Phac9g03788 346 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 346 IPR044532 -
Phac9g03788 346 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g03788 346 MobiDBLite consensus disorder prediction 40 93 - -
Phac9g03788 346 Pfam Transcription factor regulating root and shoot growth via Pin3 105 159 IPR013591 -
Phac9g03788 346 Pfam Transcription factor regulating root and shoot growth via Pin3 291 345 IPR013591 -
Phac9g03788 346 MobiDBLite consensus disorder prediction 44 58 - -
Phac9g03788 346 ProSiteProfiles BRX domain profile. 105 160 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03788 Phac-Chr9 36827558 36833836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03788 1 346 Major Intrinsic Protein MIP AT1G31880 42.408 2.65e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03788 - - pvu:PHAVU_009G229100g 636.336