Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03786 ATGGGTGATGTTCTAAGCCCTTTCACAGTCTCATCCCCTCCTCCACCCTCTTCTTCTTCCAAGAACAACACCATGCCCATGTTGTACTACGGTCTTGTGGTGGTGGGAACCGCCGCCATAGTGCTCGCCATATACAACCTCCTTCTCCTCAGACGCGGCAACGCGCGGTCGCAGCCTTCTGGGGCGAGTTCCAACGGTTTGGGAACAACAATTGACGGCGTTTCGGAGATAACGAGGAGGTTGGAGAGTCAACAAAGACACTTGCTGTCGAGCTTCAAGTACAAGAAAGAAGAGGTCGGAAAAGAAAAAAAAGAAGAAGAAGAAGAAGAAGAGTTGGAAGATTTTGAGTGCCCCGTTTGCTTGTCGGTTTATGAAGAAGGAGAAGAAGTGAGGAAGCTTCCACAGTGCAAACACTATTTCCACGTTCTTTGCATAGACATGTGGCTCTTCTCTCACTTCGATTGCCCCATTTGCAGAACACCCGTTCTCGACAATTCTCTCCATGCCTTCATTGAATCTGGTCGCATCTCATAG 534 0.4888 MGDVLSPFTVSSPPPPSSSSKNNTMPMLYYGLVVVGTAAIVLAIYNLLLLRRGNARSQPSGASSNGLGTTIDGVSEITRRLESQQRHLLSSFKYKKEEVGKEKKEEEEEEELEDFECPVCLSVYEEGEEVRKLPQCKHYFHVLCIDMWLFSHFDCPICRTPVLDNSLHAFIESGRIS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03786 177 SUPERFAMILY RING/U-box 107 164 - -
Phac9g03786 177 SMART ring_2 117 158 IPR001841 -
Phac9g03786 177 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 162 IPR044675 -
Phac9g03786 177 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Phac9g03786 177 Pfam Ring finger domain 116 159 IPR001841 -
Phac9g03786 177 CDD RING-H2_EL5-like 117 159 - -
Phac9g03786 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 167 IPR013083 -
Phac9g03786 177 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g03786 177 FunFam RING-H2 finger protein ATL1 69 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03786 Phac-Chr9 36808549 36809637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03786 16 162 C3H Transcription Factor Family AT1G04360 29.870 2.33e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03786 - - gmx:102662517 186.808