Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03784 ATGGAAGAAGAAAGTGGCGTGGCAGACAAGAAAGTGACAAAGAACGAGGTTGTTCTACGAATTTCAGACTCTGAAGAAGCCAAGAATGCAATGAAGGAAATAAAAGATTCTGGAAGTTTCCCAGTAGCTGAAAGCAGTTCCCTTTCTCCTCAGCACAACACCCTCACCCAGATAAGTAAAAGGTTTAGAGATTCTCATGGTGAAATCACAGAGCCTCTGAGCAACAAGGATCAAGTTTCCACAGAGTTGGTGACAACTTCAAAGAAGTTGATGGGTCGGTCGGAATTTTCGAAGCCAAAGTCCAGAATGGTGGAACCACCGTATCCAAGATATGCAAAAATTGTTGATGAAAAGGCTCGAGTGACAAGTTCATTTGCAAGGAATTCTCCTAACAGGAATGTTCCGGAAGCAACTGTAGTCACCCCAAGAACCCCCTTTCGAGGGACTCCTGCGGAAGAAGATGATGATGATGAAGTGTACAAGCTTGCAAATATTGAAGTTAGCAAGAGATCTGGTAGAAAGTGGATAGTTGTTGAGTTGTTTGCTTTTGCTTTAATCATGGGGTTTTTTATTGCAAGCTTGACCGTTACTGAGTTGCAAAAAAGAGAGGTTTGGGGTTTGAAGCTGTGGAAATGGTGTGTATTTATATTGGTTATCCTCTGTGGTAGACTGGTCACTGAGTGGTTCATCAATGTTTTGGTTTTCTTGATTGAGAGGAACTTTTTGTTTAAGAAGAAGGTTTTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAGTGCTTTATATGGCTGAGTTTGGTTCTTTTGACATGGGAAATGCTTTTCAGCCCTGGAGTGAAGAGAACCAGTAAGGTTGGTAGGGTTCTTAATTACATTACTCTGACTCTTGCTTCTTGTCTTATTGGAGCAGCTGTATGGTTAGCCAAAACATTGTTGATAAAGCTTTTAGCTTCAAAATTTCAATCTACTAGATTTTTTGACAGGGTGCAAGAATCAATCTTTCATCAATACATTCTCAAGACTCTTTCAGGCCCTCCCTTGATGGAGGTGGCTGAAAAGGTAGGTTCCACTTCAAATAGTGGCCAACTCAGTTTTAAGACCATGATTAATACGAAGGAAGGGGAGATAAAACAAGTAATTCATGTACACAAGCTCAAGAAAATGAAACATAATAAAGTTTCTCCTTTGACTATGAAAGGGTTGATTAATGTGATAAGGAGTTCTGGGTTGTCTACCATCTCCTATGCACAGGTTGAAGATGAGAATGACCAGAAAGATGATCAAATTAATAGTGAGTGGGAAGCAAAGGCAGCTGCTTATAGAATTTTTAGGAACGTTGCCAAGCCTGGACACAAGTATATTGAGATGGATGACCTCTTGCGATTCATGAAAATTGAACAAGTGGAAAATTTGCTTCCACTATTTGAAGGGGCAGTTGAGACTAGAAGAATTAAGAGGAAGTCTCTCAAGAACTGGCTGGTGAAAGTCTACCTTGGACGCAGATCGCTCATACATTCACTAAATGATACCAACACAGCTGTTGATGACTTGAATATACTTGCTTCTGCAGTTGTGGTTATTGTGGTCATTGTTGTGTGGCTTCTTCTAACGGGTTTCTTAACAACTAAAGTTCTTGTCTTTATTTCATCCCAGCTTTTACTTGTGGGTTTCATGTTTGGCAACACAGCTAAGACTGTATTTGAAGCTATTATATTTGTTTTCATAGTGCACCCGTTTGATGTTGGTGATCGCTGTGTCATTGATGATGTTCAGATGGTTGTGGAAGAGATGAACATACTAACTACTGTCTTTTTGAGATATGACAATGAAAAGATTTTCTATCCAAATTCAGTTCTGGCAACAAAGCCAATCAGTAACTTCAACAGGAGTCCAGAAATGTGTGATTCTGTTGAATTTGCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTCTAAAGGCAAAGTTAAAAGTATATTTGGAGAGTAGGCCTCAACACTGGCAAACTAAACACAACGTATTGGTTAAGGACATTGAGGATGTAAATAAGATGAAAATGGCTGTGAATGTTACTCACACCATAAATTTTCAGAACTATGGGGATAAGAACAGCAGAAGATCCGAATTAGTTCTGGAGTTAAAGAAAATTCTTGAAGACCTTAATATTAAATATCATCTGCTGACACAAGAAGTTCATCTTGTCAGTTATGTAAGGTCACAAGACTCAACATGGCCAACAGTTTGA 2247 0.3903 MEEESGVADKKVTKNEVVLRISDSEEAKNAMKEIKDSGSFPVAESSSLSPQHNTLTQISKRFRDSHGEITEPLSNKDQVSTELVTTSKKLMGRSEFSKPKSRMVEPPYPRYAKIVDEKARVTSSFARNSPNRNVPEATVVTPRTPFRGTPAEEDDDDEVYKLANIEVSKRSGRKWIVVELFAFALIMGFFIASLTVTELQKREVWGLKLWKWCVFILVILCGRLVTEWFINVLVFLIERNFLFKKKVLYFVYGVKKSVQCFIWLSLVLLTWEMLFSPGVKRTSKVGRVLNYITLTLASCLIGAAVWLAKTLLIKLLASKFQSTRFFDRVQESIFHQYILKTLSGPPLMEVAEKVGSTSNSGQLSFKTMINTKEGEIKQVIHVHKLKKMKHNKVSPLTMKGLINVIRSSGLSTISYAQVEDENDQKDDQINSEWEAKAAAYRIFRNVAKPGHKYIEMDDLLRFMKIEQVENLLPLFEGAVETRRIKRKSLKNWLVKVYLGRRSLIHSLNDTNTAVDDLNILASAVVVIVVIVVWLLLTGFLTTKVLVFISSQLLLVGFMFGNTAKTVFEAIIFVFIVHPFDVGDRCVIDDVQMVVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFNRSPEMCDSVEFAVDVSTSIESIGALKAKLKVYLESRPQHWQTKHNVLVKDIEDVNKMKMAVNVTHTINFQNYGDKNSRRSELVLELKKILEDLNIKYHLLTQEVHLVSYVRSQDSTWPTV* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03784 748 MobiDBLite consensus disorder prediction 132 152 - -
Phac9g03784 748 Pfam Mechanosensitive ion channel 522 724 IPR006685 GO:0016020|GO:0055085
Phac9g03784 748 Coils Coil 711 731 - -
Phac9g03784 748 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 8 737 IPR016688 -
Phac9g03784 748 FunFam Predicted mechanosensitive ion channel 578 627 - -
Phac9g03784 748 PIRSF Memb_At2g17000 1 745 IPR016688 -
Phac9g03784 748 Gene3D - 578 627 IPR023408 -
Phac9g03784 748 SUPERFAMILY Sm-like ribonucleoproteins 568 627 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03784 Phac-Chr9 36778844 36782108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03784 25 734 Mechanosensitive Ion Channel Family AT5G12080 48.619 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03784 K22048 - gmx:100777332 1112.44