Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03776 ATGGAAAGCAAGAATTGTTGTGAAAAAGAAGGACCATGGTCTTCTGAAGAAGACCAAATTCTCTTCAACTGTGTTCATCTCAGTGGAGAAGGAAATTGGAGAGACCTTCCCCAAAGAGCTGGGTTGAAACGATGTGGTGAGAGTTGCAAACATCGATGGCTGAACTATCTCAAGCCAACCATCCCCACAGACAACTTTTCTTGGGATGAACAAGAACTCATAATCAGACTGCATAAGCTCTTGGGGAATAGATGGTCTATGATTGCTGGAAGATTACCAGGACGCAGTGAAGATGAGATAAAGAAGTTCTGGAATATTTATTTGAGCAAGAAGGAGATAGAAGAGAAGCAGCAAAAGAAGAATAAAGTTGCGAGCACAAGTGTGGCAACTGCTAGCATGTCCAGTGTTCAATCTCCATGGTGCTCCCAAAACCACCTTAATATCAATTCCATGGAGTCTCCAAACCCTGTCATAGTTAGACCTAAAGTTGTTAGGTTAACTAAGGTTGTGGTGCCAAGAGAGGTACCCAATGGAAAATGCAATCAATTTACCTCTGCATCAATTTCATAA 570 0.4175 MESKNCCEKEGPWSSEEDQILFNCVHLSGEGNWRDLPQRAGLKRCGESCKHRWLNYLKPTIPTDNFSWDEQELIIRLHKLLGNRWSMIAGRLPGRSEDEIKKFWNIYLSKKEIEEKQQKKNKVASTSVATASMSSVQSPWCSQNHLNINSMESPNPVIVRPKVVRLTKVVVPREVPNGKCNQFTSASIS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03776 189 CDD SANT 65 108 IPR001005 -
Phac9g03776 189 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Phac9g03776 189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Phac9g03776 189 Gene3D - 10 62 - -
Phac9g03776 189 CDD SANT 12 57 IPR001005 -
Phac9g03776 189 Gene3D - 65 126 - -
Phac9g03776 189 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 136 - -
Phac9g03776 189 FunFam MYB-related transcription factor 9 62 - -
Phac9g03776 189 SMART sant 62 110 IPR001005 -
Phac9g03776 189 SMART sant 9 59 IPR001005 -
Phac9g03776 189 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Phac9g03776 189 SUPERFAMILY Homeodomain-like 10 104 IPR009057 -
Phac9g03776 189 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Phac9g03776 189 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Phac9g03776 189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03776 Phac-Chr9 36719978 36722618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03776 6 115 MYB Transcription Factor Family AT3G13540 54.386 1.32e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g03776 Myb_DNA-binding 8.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03776 K09422 - gmx:778159 226.868