Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03726 ATGCAAAAGGAGGCTGACTTCGTTCCCAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCTCTTCACGCTGATCCTGAAACTGATGAGGTCTATGCGCAGATGACCCTTCAACCTGTTACTAAATATGACAAGGAAGCAATATTGGCATCTGACATGGGTCTCAAACAAAACCAACAACCTACTGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCCCGTAGAGCAGCTGAGAAAATATTCCCCCTTCTGGATTTTTCAATGCAACCTCCAGCTCAGGAGATTGTTGCCAAAGATTTGCATGACAGTACGTGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTACTGACTACCGGTTGGAGTGTCTTTGTTAGCACAAAAAGGCTGTTTGCTGGAGATTCAGTTCTCTTTATCAGGGATGAAAAACAGCAACTTCTTTTAGGTATAAAGAGAGCTAACAGACAGCAACCAGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCACATTGGTATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAACAGCCCATTTACTATATTTTATAATCCAAGGGCCAGCCCCTCTGAATTTGTAATTCCATTGGCCAAGTATAATAAAGCCCTCTACAATCAAGTCTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACCGAGGAGTCAGGGGTACGCAGACATATGGGTACAATCACTGGGATCAGTGACTTGGATCCTGTCAGATGGAAGAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGCCCAAGCAGAGTTTCAATTTGGGATATTGAACCAGTAGTGACTCCTTTCTACATTTGTCCACCTCCATTTTTTAGGCCAAAGTTCCCCAAGCAGCCAGGAATGCCAGATGATGATTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGATGACCTTGGGATGAAGGATGCCTCAAGTTCAATCTTCCCAGGTTTGAGTTTGGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTCTCCGCTGTCCAATCTGGATTTATGCCCCCATCCATGCTTTCATCCAATGCACTGCATGGTAACCTTCCCACTGATGATCCATCCAAATTATTGAACTTTCAAGCTCCTGTCCTCTCTTCACCAAATCTACAATTTAACAAACCTAACTTACCAAACCAAGTCAACCAATTGCAACAACCCCCAACATCATGGCCTCCACAGCAGCAACAGCAGAAGCTGCAGTCATTGATGCCAACACCCTTAAACCCGCTCCAACAGCAGCAACAGAGGCAACAACAGCTGCCTGTACTGCAAAACCTGTCACAACCACAGCAACAACAGCCCCAAATGCCCCAACAGAGAGCACAACAGCCACAACAACAGCAGCAGCAGTCATGTCAACAGACCATCATGAATAATGGGGCAGTTTCTTCCAACCAGATTCCAAATCAGTGTGTGCAGCAACCAGTGACATACTCCCAGCTTCAGCAACAGCAATTACTCTCAGGAAATATCCCACCCCAACAAAGTTTTCAATCACCCAATAAGAATACATTGCTGATGACATCCTTACCGCAAGACTCTCAGTTTCAACAACAAATAGACCAGCAAGCTAGTCTCTTACAGAGGCAGCAGCAGCAGACACAGTTGCAATCATCGCCATTGCAGTTATTGCAACAAAGCTTGTCACAGAGGGCACCTCAGCAACCACAAATGACACAAATGTCACAGCAAAACAGCTCAGAGCAACAACCACAGTTGCAGTTGCTCCAGAAATTGCAGCAGCAACAACAGCAACAACAGCAACAACAACAACAGCAACAACAACAACTCCTTTCCACTTCTAGCCCACTTTTGCAGTCTCAGCTTCTACAGCAACAAAATACTCATCAACAAAACCAGCAATTACCGCAGCTGCCTCTATCACAGTGTCATCAGTCTCAACAGCTTGGCAACAATGCTTTCTCAATGGAGAAGCTTTTCAATGGCAACAACTACTCTTCTTCGTCTCTGATGCAAACACAGCAGCTTCCTGTGAACCAATCCCATAATACACAGAAATCATTAACTAATACTAGAGCTCCTTCAACTCTCACAGATGGAGATGCCCCATCATGCTCAACTTCACCATCTACGAATAACTGCCAGATATCTCCTTCAAATCTGATTAAAAGAAATCAACAGGTACCAACCACATTAGGAGGACCTTCGGTAGTTGAACCTACCAATCATTTGATACAGGAGCTTCATAGAAAGTCTGAGATGCAGATCAAGCACGAATTACCCAGTGTAAGAGGACCTGACCAGCTGAAGTGCAAGGGGACAATTGCTGATCAGATGGAAGCTTCTTCTGGAACATCTTACTCTATTGATCCTAATAATATCCACCAGAACTTCCCACTTCCCAGTTTCTGCATGGACGGTGATGTCCAATCACACCCAAGAAATAATCTTCCATTTGCCTCTAATCTTGATGGATTAACACCTGATACTTTGCTCTCAAGAGGGTATGATTCTCAAAAAGATCTTCAAAACTTGCTGTCCAATTATGGTGGCGCTCCAAGAGACATTGAAACTGAGCTGTCCACTGCTGCCATTACTTCGCAGCCATTTGGGGTGCCAGACATGCCTTTTAAGCCTGGATGCTCCAGTGATATTGCCATCAATGATCCTGGGGTTTTGAATAATGGCTTGTGGGCTAGTCAGACTCAAAGAATGAGGACATATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATTGATGTCACCCGTTACAAGGGATATGATGAACTCCGGCATGATTTGGCTAGGATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACAGAGTGGAAACTAGTCTACGTAGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAGCAAATGAGCTTGGATGGAGATTTAGGCCATGTTCCAGTCCCCAATCAAGCTTGTAGTGGGACAGATAATGGAAATGCATGGAGGGGACAGTATGATGATAACTCTGCAGCCTCGTTTAATCGATAA 3201 0.4424 MQKEADFVPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVTKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPLLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRHMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPDDDSDIENAFKRAMPWLGDDLGMKDASSSIFPGLSLVQWMSMQQNNQFSAVQSGFMPPSMLSSNALHGNLPTDDPSKLLNFQAPVLSSPNLQFNKPNLPNQVNQLQQPPTSWPPQQQQQKLQSLMPTPLNPLQQQQQRQQQLPVLQNLSQPQQQQPQMPQQRAQQPQQQQQQSCQQTIMNNGAVSSNQIPNQCVQQPVTYSQLQQQQLLSGNIPPQQSFQSPNKNTLLMTSLPQDSQFQQQIDQQASLLQRQQQQTQLQSSPLQLLQQSLSQRAPQQPQMTQMSQQNSSEQQPQLQLLQKLQQQQQQQQQQQQQQQQQLLSTSSPLLQSQLLQQQNTHQQNQQLPQLPLSQCHQSQQLGNNAFSMEKLFNGNNYSSSSLMQTQQLPVNQSHNTQKSLTNTRAPSTLTDGDAPSCSTSPSTNNCQISPSNLIKRNQQVPTTLGGPSVVEPTNHLIQELHRKSEMQIKHELPSVRGPDQLKCKGTIADQMEASSGTSYSIDPNNIHQNFPLPSFCMDGDVQSHPRNNLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAITSQPFGVPDMPFKPGCSSDIAINDPGVLNNGLWASQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPVPNQACSGTDNGNAWRGQYDDNSAASFNR* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03726 1066 SMART B3_2 70 172 IPR003340 GO:0003677
Phac9g03726 1066 MobiDBLite consensus disorder prediction 1044 1066 - -
Phac9g03726 1066 Coils Coil 618 642 - -
Phac9g03726 1066 FunFam Auxin response factor 934 1028 - -
Phac9g03726 1066 Gene3D - 934 1028 - -
Phac9g03726 1066 Gene3D - 233 304 - -
Phac9g03726 1066 SUPERFAMILY CAD & PB1 domains 953 1017 - -
Phac9g03726 1066 ProSiteProfiles PB1 domain profile. 939 1032 IPR000270 GO:0005515
Phac9g03726 1066 Pfam AUX/IAA family 937 1025 IPR033389 -
Phac9g03726 1066 Pfam Auxin response factor 196 278 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac9g03726 1066 ProSiteProfiles B3 DNA-binding domain profile. 70 172 IPR003340 GO:0003677
Phac9g03726 1066 FunFam Auxin response factor 68 172 - -
Phac9g03726 1066 CDD B3_DNA 69 161 IPR003340 GO:0003677
Phac9g03726 1066 MobiDBLite consensus disorder prediction 593 621 - -
Phac9g03726 1066 MobiDBLite consensus disorder prediction 414 445 - -
Phac9g03726 1066 Gene3D - 67 171 IPR015300 -
Phac9g03726 1066 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1028 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac9g03726 1066 SUPERFAMILY DNA-binding pseudobarrel domain 60 199 IPR015300 -
Phac9g03726 1066 Pfam B3 DNA binding domain 70 171 IPR003340 GO:0003677
Phac9g03726 1066 MobiDBLite consensus disorder prediction 471 498 - -
Phac9g03726 1066 MobiDBLite consensus disorder prediction 710 752 - -
Phac9g03726 1066 FunFam Auxin response factor 233 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03726 Phac-Chr9 36317809 36325072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03726 1 431 B3 DNA Binding Superfamily AT1G19220 82.599 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac9g03726 AUX_IAA 2.9e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03726 K14486 - gmx:100804628 905.59