Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03724 ATGAAGGCTCCTCCAAATGGCTACTTGCCTAATTCCAGCGAAGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTGGTTTACTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGACTTCGTTCCCAGTTACCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCTCTTCACGCTGATCCTGAAACTGATGAGGTCTATGCGCAGATGACCCTTCAACCTGTTACTAAATATGACAAGGAAGCAATATTGGCATCTGACATGGGTCTCAAACAAAACCAACAACCTACTGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCCCGTAGAGCAGCTGAGAAAATATTCCCCCTTCTGGATTTTTCAATGCAACCTCCAGCTCAGGAGATTGTTGCCAAAGATTTGCATGACAGTACGTGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTACTGACTACCGGTTGGAGTGTCTTTGTTAGCACAAAAAGGCTGTTTGCTGGAGATTCAGTTCTCTTTATCAGGGATGAAAAACAGCAACTTCTTTTAGGTATAAAGAGAGCTAACAGACAGCAACCAGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCACATTGGTATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAACAGCCCATTTACTATATTTTATAATCCAAGGGCCAGCCCCTCTGAATTTGTAATTCCATTGGCCAAGTATAATAAAGCCCTCTACAATCAAGTCTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACCGAGGAGTCAGGGGTACGCAGACATATGGGTACAATCACTGGGATCAGTGACTTGGATCCTGTCAGATGGAAGAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGCCCAAGCAGAGTTTCAATTTGGGATATTGAACCAGTAGTGACTCCTTTCTACATTTGTCCACCTCCATTTTTTAGGCCAAAGTTCCCCAAGCAGCCAGGAATGCCAGATGATGATTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGATGACCTTGGGATGAAGGATGCCTCAAGTTCAATCTTCCCAGGTTTGAGTTTGGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTCTCCGCTGTCCAATCTGGATTTATGCCCCCATCCATGCTTTCATCCAATGCACTGCATGGTAACCTTCCCACTGATGATCCATCCAAATTATTGAACTTTCAAGCTCCTGTCCTCTCTTCACCAAATCTACAATTTAACAAACCTAACTTACCAAACCAAGTCAACCAATTGCAACAACCCCCAACATCATGGCCTCCACAGCAGCAACAGCAGAAGCTGCAGTCATTGATGCCAACACCCTTAAACCCGCTCCAACAGCAGCAACAGAGGCAACAACAGCTGCCTGTACTGCAAAACCTGTCACAACCACAGCAACAACAGCCCCAAATGCCCCAACAGAGAGCACAACAGCCACAACAACAGCAGCAGCAGTCATGTCAACAGACCATCATGAATAATGGGGCAGTTTCTTCCAACCAGATTCCAAATCAGTGTGTGCAGCAACCAGTGACATACTCCCAGCTTCAGCAACAGCAATTACTCTCAGGAAATATCCCACCCCAACAAAGTTTTCAATCACCCAATAAGAATACATTGCTGATGACATCCTTACCGCAAGACTCTCAGTTTCAACAACAAATAGACCAGCAAGCTAGTCTCTTACAGAGGCAGCAGCAGCAGACACAGTTGCAATCATCGCCATTGCAGTTATTGCAACAAAGCTTGTCACAGAGGGCACCTCAGCAACCACAAATGACACAAATGTCACAGCAAAACAGCTCAGAGCAACAACCACAGTTGCAGTTGCTCCAGAAATTGCAGCAGCAACAACAGCAACAACAGCAACAACAACAACAGCAACAACAACAACTCCTTTCCACTTCTAGCCCACTTTTGCAGTCTCAGCTTCTACAGCAACAAAATACTCATCAACAAAACCAGCAATTACCGCAGCTGCCTCTATCACAGTGTCATCAGTCTCAACAGCTTGGCAACAATGCTTTCTCAATGGAGAAGCTTTTCAATGGCAACAACTACTCTTCTTCGTCTCTGATGCAAACACAGCAGCTTCCTGTGAACCAATCCCATAATACACAGAAATCATTAACTAATACTAGAGCTCCTTCAACTCTCACAGATGGAGATGCCCCATCATGCTCAACTTCACCATCTACGAATAACTGCCAGATATCTCCTTCAAATCTGATTAAAAGAAATCAACAGGTACCAACCACATTAGGAGGACCTTCGGTAGTTGAACCTACCAATCATTTGATACAGGAGCTTCATAGAAAGTCTGAGATGCAGATCAAGCACGAATTACCCAGTGTAAGAGGACCTGACCAGCTGAAGTGCAAGGGGACAATTGCTGATCAGATGGAAGCTTCTTCTGGAACATCTTACTCTATTGATCCTAATAATATCCACCAGAACTTCCCACTTCCCAGTTTCTGCATGGACGGTGATGTCCAATCACACCCAAGAAATAATCTTCCATTTGCCTCTAATCTTGATGGATTAACACCTGATACTTTGCTCTCAAGAGGGTATGATTCTCAAAAAGATCTTCAAAACTTGCTGTCCAATTATGGTGGCGCTCCAAGAGACATTGAAACTGAGCTGTCCACTGCTGCCATTACTTCGCAGCCATTTGGGGTGCCAGACATGCCTTTTAAGCCTGGATGCTCCAGTGATATTGCCATCAATGATCCTGGGGTTTTGAATAATGGCTTGTGGGCTAGTCAGACTCAAAGAATGAGGACATATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATTGATGTCACCCGTTACAAGGGATATGATGAACTCCGGCATGATTTGGCTAGGATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACAGAGTGGAAACTAGTCTACGTAGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAGCAAATGAGCTTGGATGGAGATTTAGGCCATGTTCCAGTCCCCAATCAAGCTTGTAGTGGGACAGATAATGGAAATGCATGGAGGGGACAGTATGATGATAACTCTGCAGCCTCGTTTAATCGATAA 3369 0.444 MKAPPNGYLPNSSEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVTKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPLLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALYNQVSLGMRFRMMFETEESGVRRHMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPDDDSDIENAFKRAMPWLGDDLGMKDASSSIFPGLSLVQWMSMQQNNQFSAVQSGFMPPSMLSSNALHGNLPTDDPSKLLNFQAPVLSSPNLQFNKPNLPNQVNQLQQPPTSWPPQQQQQKLQSLMPTPLNPLQQQQQRQQQLPVLQNLSQPQQQQPQMPQQRAQQPQQQQQQSCQQTIMNNGAVSSNQIPNQCVQQPVTYSQLQQQQLLSGNIPPQQSFQSPNKNTLLMTSLPQDSQFQQQIDQQASLLQRQQQQTQLQSSPLQLLQQSLSQRAPQQPQMTQMSQQNSSEQQPQLQLLQKLQQQQQQQQQQQQQQQQQLLSTSSPLLQSQLLQQQNTHQQNQQLPQLPLSQCHQSQQLGNNAFSMEKLFNGNNYSSSSLMQTQQLPVNQSHNTQKSLTNTRAPSTLTDGDAPSCSTSPSTNNCQISPSNLIKRNQQVPTTLGGPSVVEPTNHLIQELHRKSEMQIKHELPSVRGPDQLKCKGTIADQMEASSGTSYSIDPNNIHQNFPLPSFCMDGDVQSHPRNNLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAITSQPFGVPDMPFKPGCSSDIAINDPGVLNNGLWASQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPVPNQACSGTDNGNAWRGQYDDNSAASFNR* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03724 1122 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Phac9g03724 1122 Gene3D - 123 227 IPR015300 -
Phac9g03724 1122 FunFam Auxin response factor 990 1084 - -
Phac9g03724 1122 MobiDBLite consensus disorder prediction 1100 1122 - -
Phac9g03724 1122 FunFam Auxin response factor 289 361 - -
Phac9g03724 1122 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac9g03724 1122 Coils Coil 674 698 - -
Phac9g03724 1122 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Phac9g03724 1122 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 1084 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac9g03724 1122 SUPERFAMILY CAD & PB1 domains 1009 1073 - -
Phac9g03724 1122 FunFam Auxin response factor 124 228 - -
Phac9g03724 1122 Gene3D - 289 360 - -
Phac9g03724 1122 CDD B3_DNA 125 217 IPR003340 GO:0003677
Phac9g03724 1122 MobiDBLite consensus disorder prediction 527 554 - -
Phac9g03724 1122 Gene3D - 990 1084 - -
Phac9g03724 1122 ProSiteProfiles PB1 domain profile. 995 1088 IPR000270 GO:0005515
Phac9g03724 1122 MobiDBLite consensus disorder prediction 649 677 - -
Phac9g03724 1122 SMART B3_2 126 228 IPR003340 GO:0003677
Phac9g03724 1122 MobiDBLite consensus disorder prediction 766 808 - -
Phac9g03724 1122 MobiDBLite consensus disorder prediction 470 501 - -
Phac9g03724 1122 Pfam AUX/IAA family 993 1081 IPR033389 -
Phac9g03724 1122 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03724 Phac-Chr9 36316551 36325072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03724 1 487 B3 DNA Binding Superfamily AT1G19220 83.162 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac9g03724 AUX_IAA 3.1e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03724 K14486 - gmx:100804628 1008.44