Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03720 ATGGCGCTGCAATTTCTTCTCCTTCTGCTCGCTGTTGCTGCTCATGGACTCGCTTCCAATGCGACACTGAACGAGACTTGCGGATACTTCGATGCTTCTCTCAGTAGAGATACAAATGTCCCTTGCCCAATTGGTTGGGTTATGGCCCCTAACAAGACCAAGTGCTTTCTTCATGTTGGGAGGCCTCAATCTTGGAATGACTCAGAGACCTGTTGTAGTAAGTATGGTGGACATTTAGCGTCATTGACATCACTTCAGGAGCTACAATTTGCTCAGAGCCTATGTGGTGAATCTGTGAATAGTTGCTGGATTGGTGGACAAAGATTCAACACTACAGCTGGTTATCAGTGGATATGGTCTGACAATTCAGCAGGGAATAACTCCATATTTCCATTGGAAGATGTCTTTCCCCATTGTAATGGAACTGAACTATCCTGTCATAAAAACAGTACAGACAATTTGTGCACGGTAATGACTAATAATTCAAACTCTCTCATGAGTGAGAGATGCGACAATCCTCACTCTTCTCTATGTATACTTGATATAGATGCAGCATGTAACCGTATGCACTGCCATAGGGATTATTACCTTATCATCCTCATAGTGGTGAGTGCCTTGATACTCTCCACAACATTAGCAGTGGTAGTTTGGCTTCTTGTTTATAAGCGGGGCAAAAAAAGAAGGCGGTCTAGAAAAATATCTATTCCAGGAGCTTCTCTTCCATCATGGAAAGTCTTCACCAAAGAGGAATTAAGGTCAATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTTGGCGATACCAAGACTGGTGGTACATACAGTGGGGTTTTATCAGATGGTTCAAGGGTTGCAGTTAAGAGATTAAAGAGGACAAGCTTTCAGAGAAAAAAGGAGTTTTATTCTGAAATTAGCAGGGTTGCTAGGCTTAGATATCCCAATCTGGTTGCTGTGATGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGTCCCTTGGATAAATGGCTACATCACATACCTAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCGACAACGCTTGCTCAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCACAAGTGGTGCATCGAGATATACGTGCAAGCAATGTACTGCTGGATGAGGAGTTTGGAGCACGGCTGATGGGTGTTGGTCTGTCCAAGATTGTGCCGTACGAAGTAATGCATGAGAGGACTGTGATGGCTGGTGGAACTTCTGGATATCTTGCTCCAGAGTTTGTGTATAGAAACGAGTTTACAACAAAGAGTGACGTATATAGTTTTGGCGTCCTACTACTTGAGATAGTAAGTGGACGTAGACCTACACAGGCAGTTGATTCTGTTGGTTGGCAGAGTATCTTTGAATGGGCAACACCTCTTGTGCAAGTTCATCGCTACCATGAACTCTTGGATCCTCATATAACTTCATCCTCTTCTAGCATCATCCCAGAGGCTAGTACCATCCAAAAGGTGGTTGACCTTGTTTATTCCTGCACGCAGCATGTTCCTTCTATGCGCCCTAGAATGTCTCATGTTGTTCACCAGCTGCAACAGATTGCCCAACCACCTGCAAAGTAA 1638 0.4389 MALQFLLLLLAVAAHGLASNATLNETCGYFDASLSRDTNVPCPIGWVMAPNKTKCFLHVGRPQSWNDSETCCSKYGGHLASLTSLQELQFAQSLCGESVNSCWIGGQRFNTTAGYQWIWSDNSAGNNSIFPLEDVFPHCNGTELSCHKNSTDNLCTVMTNNSNSLMSERCDNPHSSLCILDIDAACNRMHCHRDYYLIILIVVSALILSTTLAVVVWLLVYKRGKKRRRSRKISIPGASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVLSDGSRVAVKRLKRTSFQRKKEFYSEISRVARLRYPNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGARLMGVGLSKIVPYEVMHERTVMAGGTSGYLAPEFVYRNEFTTKSDVYSFGVLLLEIVSGRRPTQAVDSVGWQSIFEWATPLVQVHRYHELLDPHITSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQIAQPPAK* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03720 545 SUPERFAMILY Protein kinase-like (PK-like) 232 537 IPR011009 -
Phac9g03720 545 ProSitePatterns Tyrosine protein kinases specific active-site signature. 381 393 IPR008266 GO:0004672|GO:0006468
Phac9g03720 545 SUPERFAMILY C-type lectin-like 35 179 IPR016187 -
Phac9g03720 545 Pfam Lectin C-type domain 62 178 IPR001304 -
Phac9g03720 545 Pfam Protein tyrosine and serine/threonine kinase 269 536 IPR001245 GO:0004672|GO:0006468
Phac9g03720 545 Gene3D Phosphorylase Kinase; domain 1 237 334 - -
Phac9g03720 545 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 335 545 - -
Phac9g03720 545 SMART tyrkin_6 268 536 IPR020635 GO:0004713|GO:0006468
Phac9g03720 545 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 540 - -
Phac9g03720 545 CDD CLECT 54 178 - -
Phac9g03720 545 ProSiteProfiles C-type lectin domain profile. 51 179 IPR001304 -
Phac9g03720 545 ProSiteProfiles Protein kinase domain profile. 259 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g03720 545 Gene3D Transferase(Phosphotransferase) domain 1 335 541 - -
Phac9g03720 545 SMART CLECT_2 42 179 IPR001304 -
Phac9g03720 545 FunFam C-type lectin receptor-like tyrosine-protein kinase 236 334 - -
Phac9g03720 545 Gene3D - 29 190 IPR016186 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03720 Phac-Chr9 36261564 36266993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03720 72 542 Receptor kinase-like Gene Family AT1G52310 68.672 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Phac9g03720 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03720 - - vra:106762676 1026.93