Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03698 ATGATGTTCCATTCTCAGGGTGCGTCAAGACATTGTAGTCTCCTTGCTGTCCTGAGTGGTAAATTACGTGACACCAAACAAAAGCAGAAGCAGAGTGCTGCTTCTGAGGATCAACCTCCTTATCCCTTTCCAGAGCTTTCTTCCTCTGGCAGTCTTGAGGTCAAGTTATTGATCAAACCTAATACGGATGAACTCGGTCGAGCTCTTGAACAACTACAGCCAGATTTTGTTTACCTTCAAGGTCAGCTACTGGAAGATAGGGGAGAAATTGGGCCCCTTGTATGGGAGGATTTTGACCTGTCTGTCCCAGAAGCATTGTGTGGATTATTTGGTTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTAAGGGAGACAAATTGGCGGAGGCACTCCGTAATAAGGGAGTTCCATACACTATCTATTGGAAAAATGATTTTTCAAAGTATGCAGCTTCACATTTTCGTCATTCTTTTTTCTCTGTAGCACAGAGTACATCCAGCCATACATGGGATGCTTTCCAGCTTGCTCTGGCATCTTTTAGACTATACTGTATACAAAACAATGTCTTACCTTCTAACAGCCAGAAAGGTGTTGGTAAGCTTGGGCCTCAAATTCTTGGGGTTCCTCCCAGCATTGATACTAGTCCTTGTGTAGCAGACATGAAGGAAGAGGAAGAGGAAAGTTCACCTGAGACTATTTCTGCTGTAAAGATATATGATGAAGATGTGAACATGAGATTTCTTGTTTGTGGAGTTCCTTGCACATTGGATGCTTGCTTGTTGGGGTCTTTAGAGGATGGACTCAATGCTCTTCTGTTTACAGAAATACGAGGATGCAAACTTCACAACAGGACTAGTGCTCCACCACCACCTCTGCAGGCAGGAACATTCTCACGTGGTGTAGTGACTATGCGTTGTGATATATCCACATGTAGTACTGCTCATATATCACTTTTGGTGTCTGGTAGTGCAGACACTTGTTTTAATGATCAGCTATTGGAGAATCACATTAAGAAAGAACTCATTGAGAAGAGTCATCTTGTTCAGGCATTTCCTAATCCTGAACAAAGTAAATCACCTTCCTTAGAACCTCGAAGATCAGCCTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGACTTCCGGCATGGGCTTCACAGGTTCTTAGACAGCTTGCATCCAATCTGTCATACCGCAGCCTTGTTATGTTGGGAATTGCTAGCATTCAGGGATTGCCAGTTGCATCTTTTAATAAAGATGATGCTGAGCGCCTCCTTTTCTTTTGTACTAGGCAGGAGAAAGAAAACGGTCGTAACAAACAAGTTTTCTCTGGGATTCCAAGTTGGCTGAAACCTCCACCGCCCAGTCGAAAAAGATCTGAACCGTGCTCTAGTTCAAAGTCTATCAATCCTAGTGGCCGGGGAATTGAAGATGTTGGTGGTCATAGACAGAAATTAAATCTTGCTGCTATGAGGCCAATCCCTCAATCTCATAGACACAAGATTCTCCCCTTTTCTGGATTGTCTGGAGGTGCAAGATATGATGGAGACCATGGAAAATCAAATCAGCCGCTTGCTCCTAATAAGCATAATGTTTCAGGCCCTACTTCAGTTACAAATAGGAAATCTGTGTCGAACTCATTTCAAGCTAACCAGATTATTTCTTTGAATCCACTACCTATGAAAAAGCATGGTTGTGACAGAGTTCCAATACGTGTTTGCTCAGAGGAGGAATTCCTGAGGGATGTAATGCAGTTTTTGATCCTTCGGGGGCATAATCGTCTAATTCCGCCAGGTGGACTTGCAGAGTTCCCTGATGCCATTTTGAATGCAAAACGTCTTGATTTGTTCAACTTGTACAGGGAGGTGGTTTCAAGAGGGGGCTTTCATGTTGGAAATGGTATCAATTGGAAAGGGCAAGTTTTCTCAAAGATGCGGAATCACACTTTGACAAATAGAATGACTGTATGGATCATGAACTTATTTTTTGTCTTTCCTTTAAACATTTCCTTTCATTACATGTGCATATGTATTGGCTAA 2049 0.4246 MMFHSQGASRHCSLLAVLSGKLRDTKQKQKQSAASEDQPPYPFPELSSSGSLEVKLLIKPNTDELGRALEQLQPDFVYLQGQLLEDRGEIGPLVWEDFDLSVPEALCGLFGSKLPNTVYLETPKGDKLAEALRNKGVPYTIYWKNDFSKYAASHFRHSFFSVAQSTSSHTWDAFQLALASFRLYCIQNNVLPSNSQKGVGKLGPQILGVPPSIDTSPCVADMKEEEEESSPETISAVKIYDEDVNMRFLVCGVPCTLDACLLGSLEDGLNALLFTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSTAHISLLVSGSADTCFNDQLLENHIKKELIEKSHLVQAFPNPEQSKSPSLEPRRSASVACGSSVFEVCMRLPAWASQVLRQLASNLSYRSLVMLGIASIQGLPVASFNKDDAERLLFFCTRQEKENGRNKQVFSGIPSWLKPPPPSRKRSEPCSSSKSINPSGRGIEDVGGHRQKLNLAAMRPIPQSHRHKILPFSGLSGGARYDGDHGKSNQPLAPNKHNVSGPTSVTNRKSVSNSFQANQIISLNPLPMKKHGCDRVPIRVCSEEEFLRDVMQFLILRGHNRLIPPGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTVWIMNLFFVFPLNISFHYMCICIG* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03698 682 MobiDBLite consensus disorder prediction 517 545 - -
Phac9g03698 682 MobiDBLite consensus disorder prediction 441 482 - -
Phac9g03698 682 CDD ARID 578 652 - -
Phac9g03698 682 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 4 658 IPR042293 -
Phac9g03698 682 MobiDBLite consensus disorder prediction 527 545 - -
Phac9g03698 682 Pfam ARID/BRIGHT DNA binding domain 579 651 IPR001606 GO:0003677
Phac9g03698 682 SUPERFAMILY ARID-like 577 652 IPR036431 GO:0003677
Phac9g03698 682 Gene3D - 574 663 IPR036431 GO:0003677
Phac9g03698 682 MobiDBLite consensus disorder prediction 26 47 - -
Phac9g03698 682 ProSiteProfiles ARID domain profile. 576 673 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03698 Phac-Chr9 36083461 36091717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03698 2 658 ARID Transcription Factor Family AT3G43240 63.086 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac9g03698 ARID 4.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03698 - - gmx:100808357 1196.42