Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03694 ATGGCTTCTTCCAATTCTGTTTCTTCTCTCAACGTCGTCGGCTACACGCGCACTACTTCTCCACCACCCAACAACCACCTATCATCGTCATCACACATTACTCTTCTAGCCCTAATGCTCATCCTCCTCGCCGTTACCGTTTCGCTAGCTATTTATGTTCTTCTCCGTTACCGTAACCGTTTCCTCCGTCGTATCTCTCCCACATCCGCTTCACTATTCTCGTCCGAGAATCCTACATCGTCGGACACCGCTTCGCCTTCCGTCGTCGGCTCTCTCCCGGCGTTCTCCTTCTCCTCCGTGACGCGCCGCTCCGCCGCCTCCGGCGGCGGCGCGGACTGCGCCGTGTGCTTATCGAAGTTTGAGCAGCACGACCTTCTCCGCTTGCTACCTCTCTGCTGCCACGCTTTCCACGCTGAATGCATCGACACGTGGCTCCAATCGAACCTCACGTGTCCGCTCTGCCGATCCGCCGTCGGTGCGTCGGAGTCCGACCTCGCGAAGGTTTTCCGCTCGTCGTCCGCCGGAGGCGGCGAGAGCTTTCGGCTTGAGATAGGGAACATCAGCAGCAGCGGCCGCCACTCCACGGCGGCCGGCGAGGAAATGCGTGGGAGGTCCTATTCTGTTGGTGCGTTTGAGTATTTCATCGACGAGGAGGCTGAGGCTGAGATTGAGGTTGCGTTCAGTTATGCTCTCCGGAGAAGCGTTTCTGACGAGAAACACGACGGTGCTACGGTGGAGGCTGCGGCAGATTCTCTGCCGAGCTTGGCTGCTGAGGTAGGGCGTGGAGGAAGTAATAACAGTAGTGGCTGGTTGAAGGATTACGTTGACCGTCTTTCGAATAGCATGTCGTTTCGGAGTTCCGGAAGGTTCTTCACTGGGAGTAGTCGCCGAACCGACGTCGCTCAGGGTGGAGATTACGATTACGAAGCCAACCATTTGGGGGACGAAATCGGTGAAATGTTTCGATGGATTTCGGGGATTTGA 984 0.5681 MASSNSVSSLNVVGYTRTTSPPPNNHLSSSSHITLLALMLILLAVTVSLAIYVLLRYRNRFLRRISPTSASLFSSENPTSSDTASPSVVGSLPAFSFSSVTRRSAASGGGADCAVCLSKFEQHDLLRLLPLCCHAFHAECIDTWLQSNLTCPLCRSAVGASESDLAKVFRSSSAGGGESFRLEIGNISSSGRHSTAAGEEMRGRSYSVGAFEYFIDEEAEAEIEVAFSYALRRSVSDEKHDGATVEAAADSLPSLAAEVGRGGSNNSSGWLKDYVDRLSNSMSFRSSGRFFTGSSRRTDVAQGGDYDYEANHLGDEIGEMFRWISGI* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03694 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 160 IPR013083 -
Phac9g03694 327 CDD RING-H2_EL5-like 112 155 - -
Phac9g03694 327 SMART ring_2 113 154 IPR001841 -
Phac9g03694 327 Pfam Ring finger domain 112 155 IPR001841 -
Phac9g03694 327 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Phac9g03694 327 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 24 225 - -
Phac9g03694 327 SUPERFAMILY RING/U-box 106 160 - -
Phac9g03694 327 FunFam E3 ubiquitin-protein ligase ATL6 74 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03694 Phac-Chr9 36074876 36076226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03694 30 155 C3H Transcription Factor Family AT2G34990 37.692 3.10e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03694 K10663 - gmx:100804962 384.415