Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03685 ATGGCTGATTCATCTCATAAACTCTTCTTCCTTCTGTCTGCAATCTTCTTCTCACATACTTGTGTCCAACCATCCAATGCTTCCGTAACCAGTCAAGTTGATGTCTCTTTCATAAAATCTTTGTGCACAACGACCCCATTCCCAGACGATTGTTTAAGGTCATTGAATGTATCCATCTCAATAGGCACATCTCCAAATCCAAAGATAAACAACTACCTCATTCACTCCCTCCAAACAGCAAGATCTGAAACCATAAAGCTCATAAATCTCTTCAACAATGTTGGACACCCAAGCATCATAGAGAAGCAAAGAGGAGCAGTTCGAGACTGCCAGGAACTCCATCAATCCTCATTGGCTTCTTTGGAAGGATCCATATCAGGGATCCGTTCCTACAAACTGGACATAACTGACGTAGCAATCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAGGCCTAGATTCTGCTACTGGTACCATGAAGCCAGTTCTGGTGAAATCTGTGGTCAACACTTACAAGCATGTCAGTAACTCTCTCGCAATTCTCTCTAACCCAGAGATGGGGACTCCTGACAACAACCCTTTGAAGGGTGACCCAAAGTGGCTACCAAGCAGTGACCAAAGTTTCTTTCACGACTCAGATGGGCAAGAATATGACCCAAATGAAGTGCTAGTAGTGGCTGCAGATGGAACAGGGTATTTTAGCAGCATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCAAAGGTAGGACAGTGATCTATGTGAAAGAAGGGATTTATGAGGAAAACGTGGAAATCCCAAGCTATAAGACTAACATTGTGATGCTTGGCGATGGAAGCGATGTAACTGTCATAACTGGTAACAGAAGCGTAGGTGATGGCTGCACCACTTTCGGATCTGCAACTCTTGCGGTCTCTGGTAATGGTTTTCTTGCACGTGATATTGCAATTGAGAACAGTGCAGGGCCAGAGAAGTACCAAGCAGTGGCTTTGAGGATAAATGCAGACTTAACTGCTTTTTACAGGTGTGCAATTTATGGCTACCAAGACACTTTATATGTTCACTCCTTTAGACAATTTTACAGAGAGTGTGACATTCATGGGACCATAGATTTCATATTTGGAAATGCAGTAGTTGTTCTACAAGAATGTAACATTATATCCAGAAAACCATTGCATGGCCAAGCCACTGTGATCACTGCACAGTCCAGAGATAACCCACTTGAGCTCACTGGCATCGTAATCCAACGATGCAACATCAAAGCTTCCTTCGATAACAGCAGTGTTAAGAGCTACCTTGGGAGGCCATGGAGGCCCTTTTCTCGCACAGTTTACCTTGACTCCTTCATTGATGACTTCATTGACCCAAAGGGTTGGACAGAGTGGAATAATGATAAGAAAGGATTGGACACCTTGTATTACGGAGAGTACGAGAATGACGGACCTGGTTCCAGCACAGACAATCGTGTAAAATGGTCTGGGTACCATGTAATGGACGATGATGATGCCTACAATTTCACAGTTTCAAAGTTCATTGATGAAGTTCACTGGCTTCAGTCTACTTTTTTTCCTTTTGATTTAGGGATCTGA 1602 0.4338 MADSSHKLFFLLSAIFFSHTCVQPSNASVTSQVDVSFIKSLCTTTPFPDDCLRSLNVSISIGTSPNPKINNYLIHSLQTARSETIKLINLFNNVGHPSIIEKQRGAVRDCQELHQSSLASLEGSISGIRSYKLDITDVAIYLSAALTNKNTCLEGLDSATGTMKPVLVKSVVNTYKHVSNSLAILSNPEMGTPDNNPLKGDPKWLPSSDQSFFHDSDGQEYDPNEVLVVAADGTGYFSSITEAINFAPNNSKGRTVIYVKEGIYEENVEIPSYKTNIVMLGDGSDVTVITGNRSVGDGCTTFGSATLAVSGNGFLARDIAIENSAGPEKYQAVALRINADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIHGTIDFIFGNAVVVLQECNIISRKPLHGQATVITAQSRDNPLELTGIVIQRCNIKASFDNSSVKSYLGRPWRPFSRTVYLDSFIDDFIDPKGWTEWNNDKKGLDTLYYGEYENDGPGSSTDNRVKWSGYHVMDDDDAYNFTVSKFIDEVHWLQSTFFPFDLGI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03685 533 PANTHER PECTINESTERASE 25 523 - -
Phac9g03685 533 SUPERFAMILY Pectin lyase-like 224 532 IPR011050 -
Phac9g03685 533 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Phac9g03685 533 SMART PMEI_2 33 184 IPR006501 GO:0004857
Phac9g03685 533 CDD PMEI-like_3 40 188 - -
Phac9g03685 533 FunFam Pectinesterase 220 533 - -
Phac9g03685 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 187 IPR035513 -
Phac9g03685 533 Pfam Plant invertase/pectin methylesterase inhibitor 36 184 IPR006501 GO:0004857
Phac9g03685 533 Pfam Pectinesterase 227 517 IPR000070 GO:0030599|GO:0042545
Phac9g03685 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 186 IPR035513 -
Phac9g03685 533 Gene3D - 222 533 IPR012334 -
Phac9g03685 533 NCBIfam pectinesterase inhibitor domain 8 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03685 Phac-Chr9 36009497 36011472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03685 40 533 Carbohydrate Esterase AT2G26440 60.352 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03685 - - gmx:100776969 773.467