Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03680 ATGGCGCTTTCTTCAACCAAATACTTATCTCCAACAGTGGCCACACAAACACTCATCTTCTTCTTCCTTTTGGTTTTTCCTACTGTGTTCTCTGCCTCGCATGGCAGCAGCAGCATCAACCCCGTGGGATTCGAGTCTCTGAAGGTTTCGCCTTCTGAATTCGCGGGGACAGTTAAAACTGTGGTTGATGTGTTGCAAGATGTGACCTCTATCCTCTCTGAGTTTGGTTCCGGCTTCGGAGACTCGCTTCTTTCTAACGCCGTCTCTGATTGTCTAGATTTGCTTGACCTCTCCTCTGATGAACTTGATTGGTCTGTCTCTGCTACCCAGACGCCCCAAGGGAAGCATAACAGCACAGGAAACCTAAGTTCAGATTTGAAGACATGGGTAAGTGCTGCACTTGCGAACCAAGACACATGCATGGACGGATTCGACGGCACCAACGGCATTGTGAAGGGTTTAGTGTCCTCAGGGCTAGGCCAAGTGATGTCATTGCTGCAACAACTTCTTACACAGGTGAACCCCGTTTCGAACCACTTCCCTTTCTCTTCCACACAGGGGCAGTTTCCGTCGTGGGTTAAACCAGAGGACAGGAAGCTGCTCCAGGCAAATGGGGTGGTCGTGGATGCGGTGGTTTCCACCGATGGCACCGGGAACTTCACCAAGCTCATGGATGCAGTCATGGCTGCGCCTAATTATAGCATGAAACGCTACGTGATATTCGTGAAGAGAGGGGTTTACCATGAGAACGTTGAGATCAAGAAAAAGAAGTGGAACCTCATGATGGTCGGAGAAGGCATGAGTGCCACTGTTATCACCGGTAACAGGAGCTTCATCGACGGTTGGACCACGTTCCGGTCAGCAACTTTTGCTGTGAGTGGTAGAGGATTCATAGCACGAGACATTACCTTCCAGAACACAGCAGGACCAGAAAAGCACCAAGCGGTGGCACTGAGATCAGACTCTGATCTCTCTGTATTCTACCGATGTGGGATTTTTGGTTACCAAGACAGCCTTTATACTCACACCATGCGCCAATTCTACAGAGAATGCAGAATCAGTGGCACTGTGGATTTCATATTTGGTGATGCCACTGCCATTTTCCAAAACTGCCACATAGAGGTCAAAAAAGGGTTGCCAAATCAAAAGAACACCATCACAGCTCAAGGAAGGAAAACCCCTGATGAACCAACTGGTTTCTCAATCCAATTTTGCAACATTTCTGCTGATTCTGACCTTGTGAACTCGGTTAACTCCACCCACACATACCTTGGCAGACCCTGGAAACCATATTCCAGAACAGTTTTCATGCAGTCTTACATCAGTGATGTGTTGAGCCCAGAAGGGTGGTTGGAGTGGAATGGGGACTTTGCCTTGGACACATTATACTATGCAGAGTACTTGAATTATGGGCCTGGTGCTGGTGTTGCTAACCGAGTGAAATGGCCAGGGTACCATGTGATGAATAATTCTAGACAGGCTAGTAATTTCACAGTATCACAATTTATTGAGGGGAATCTTTGGCTACCTTCAACTGGTGTAACCTTCACATCTGGATTGGAAGAATGA 1569 0.4774 MALSSTKYLSPTVATQTLIFFFLLVFPTVFSASHGSSSINPVGFESLKVSPSEFAGTVKTVVDVLQDVTSILSEFGSGFGDSLLSNAVSDCLDLLDLSSDELDWSVSATQTPQGKHNSTGNLSSDLKTWVSAALANQDTCMDGFDGTNGIVKGLVSSGLGQVMSLLQQLLTQVNPVSNHFPFSSTQGQFPSWVKPEDRKLLQANGVVVDAVVSTDGTGNFTKLMDAVMAAPNYSMKRYVIFVKRGVYHENVEIKKKKWNLMMVGEGMSATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECRISGTVDFIFGDATAIFQNCHIEVKKGLPNQKNTITAQGRKTPDEPTGFSIQFCNISADSDLVNSVNSTHTYLGRPWKPYSRTVFMQSYISDVLSPEGWLEWNGDFALDTLYYAEYLNYGPGAGVANRVKWPGYHVMNNSRQASNFTVSQFIEGNLWLPSTGVTFTSGLEE* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03680 522 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Phac9g03680 522 Pfam Plant invertase/pectin methylesterase inhibitor 78 157 IPR006501 GO:0004857
Phac9g03680 522 PANTHER PECTINESTERASE 58 510 - -
Phac9g03680 522 Pfam Pectinesterase 209 506 IPR000070 GO:0030599|GO:0042545
Phac9g03680 522 SMART PMEI_2 34 172 IPR006501 GO:0004857
Phac9g03680 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 167 IPR035513 -
Phac9g03680 522 FunFam Pectinesterase 33 175 - -
Phac9g03680 522 FunFam Pectinesterase 203 520 - -
Phac9g03680 522 SUPERFAMILY Pectin lyase-like 209 519 IPR011050 -
Phac9g03680 522 CDD PMEI-like_4 21 177 - -
Phac9g03680 522 Gene3D - 207 522 IPR012334 -
Phac9g03680 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 177 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03680 Phac-Chr9 35932194 35936802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03680 19 520 Carbohydrate Esterase AT3G43270 65.243 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03680 K01051 - gmx:100801813 881.322