Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03677 ATGTCAGTGCCTGCATCTGGACTTAATGCAGTGATTCCTAGTACAAACCAGCTTACCATATTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCTGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGACCCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGCTGCCTCACAGAAGAATTCCATCTGCAGGCTTCAAGAATTTCCAATAGCACGCAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGATAGGCTGGGTAGCAAAGCTCCTTATCCTTCCTCATCAACCACTAAAGTGGGTGATAACATAGAGAACAACTTCTGTGCTGACAATGCACCAGAACTGATTTCCTTGAATCGAGCAGAGGAGGAATTTCATCCAACTGTCTCTGCCTCTTGA 483 0.4451 MSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIGTQSTLISPVPTRPSSPHGITNNIAASQKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVGDNIENNFCADNAPELISLNRAEEEFHPTVSAS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03677 160 Pfam Jas motif 95 119 IPR018467 -
Phac9g03677 160 ProSiteProfiles Tify domain profile. 11 46 IPR010399 -
Phac9g03677 160 Pfam tify domain 13 45 IPR010399 -
Phac9g03677 160 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 126 IPR040390 -
Phac9g03677 160 SMART tify_2 11 46 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03677 Phac-Chr9 35889540 35893623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03677 16 126 Tify Gene Family AT5G20900 51.261 1.06e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac9g03677 tify 9.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03677 K13464 - gmx:100306045 293.893