Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03675 ATGGGTGGCTCTGTCACTGTCAAGTCCGAGGTTTCCCTTCTAGAATCTTCTCCCTCTCCTGTGGAGAAACCTGATGGAGTTTGTTCCAACATGGAGGAACACCACCTGGTCCAACCCAATATGAATGACTCCTCACCCAACAAGTCAGTGCCTGCATCTGGACTTAATGCAGTGATTCCTAGTACAAACCAGCTTACCATATTCTACAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCTGAAAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGACCCAATCTACCCTCATTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGCTGCCTCACAGAAGAATTCCATCTGCAGGCTTCAAGGTGATAATTTTTGCATTTTCATGCTAGATTTAGAGATGGTAGTCTTAAATAATTGTCTTTTTATAATTTACCATATAGCAGTTGCATTGTCTTCTATCTTAATGTGA 525 0.4229 MGGSVTVKSEVSLLESSPSPVEKPDGVCSNMEEHHLVQPNMNDSSPNKSVPASGLNAVIPSTNQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIGTQSTLISPVPTRPSSPHGITNNIAASQKNSICRLQGDNFCIFMLDLEMVVLNNCLFIIYHIAVALSSILM* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03675 174 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
Phac9g03675 174 Pfam tify domain 60 92 IPR010399 -
Phac9g03675 174 MobiDBLite consensus disorder prediction 1 25 - -
Phac9g03675 174 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 128 IPR040390 -
Phac9g03675 174 SMART tify_2 58 93 IPR010399 -
Phac9g03675 174 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03675 Phac-Chr9 35889540 35893623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03675 63 150 Tify Gene Family AT5G20900 43.333 2.01e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Phac9g03675 tify 1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03675 K13464 - gmx:100306045 214.542