Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03636 ATGGAGGCTCAATTAGAGGGTAAAAATCAGTATTTGTATGGACCCGTGGTGCCAGAGATGAAGAGTGTTGGGAAGAGAAGTTTGGAGTGGGATTTGAATGATTGGAAGTGGGATGGGGATCTTTTCACTGCTACGCAACTGAATTCAGTGCCATCAGATTGTAGGAGTCGCCAGCCGTTTCCTGCTGATCCTGAAATTCTTGCAAGTGGTGGTGCTTCTAACAATTTGTCTTCTGCTCATGATGATGTTAACCTTGCGGAAGGAAGGAGAGAATTGGAGAAGAGGAGGAGAGGTGTTGCTGATGAAGGAGGGTTGGAGATGAATGATGGAGCTGGTTCTCTTAATTTGAACCTTGGGGTCCAAGTATACCCTATCATAGAAGGGGAGGAAAAAAGTGGAAAGAAGACAAAGATAACTGGGAGTACTTTGAACCGGGCTGTTTGTCAGGTGGAAGATTGTAGGGCTGATCTTAGTAGTGCGAAGGATTATCACCGCCGCCACAAAGTTTGTGATATGCATTCTAAGGCAAGCAAGGCACTAGTTGGAAATGTTATGCAGAGATTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAATTTGATGAAGGGAAGAGAAGTTGTCGAAGGCGTCTTGCAGGCCACAATAAGAGAAGGAGGAAAACGCATCCTGATGCTAGTGTACTTAATGACGGCTCTGTAAATGAAGAAAAGGGCAGTAGCTATCTGTTAATGAGTCTGCTGAGGATACTGTCCAATATGCATTCAAATGGCTCAGATAATATGACAAGCCAGGATGTTCTATCTCATCTGCTGAGGAACCTGGCAAGTGTGGCTGGTACAATTAATGGGAGAAATATAGTGTCTTTATTGGAGGGATCTCAAGATTTGGTTAAAGCTGGAACATCTGGAACTGCACAGAATGTTCCTAACACAAATTCTAATGGTCCTGAAACGTCCAGACCTTTTGATACTTCTACCAAGATGGATAATGGTCTAATCAATCAGGACCCTCCAGAGTCTATGGTACAGTGTGAGTTGACTCCTGCTAATGGTATGACTAAAAGATTTATAGCTTCGGGCAGTGATGGAGTAGGAAGTTCAAAATCTCCTTCATTACCACAGCCATCAAATGTACTTCTGTCACGGAATAGTTTTCCACCCCATTCAGTCTCAGAAGAGCCTACGGTTGGAAGAATTGGATTAAGTAATATTGACCTGAATAGTGCATATGATGATGTACAGGATTATGTTGAGAACACGCGAAATTCTCGTCCTCCTTTGCCTTCAGGGAATGGGTCCCTTGATCATCCTTTATGGATTCAATGTGACTCTCTCAAGTCAAGTCCACCACAGACAAGTAGAAACTCAGATTCAACCTCTACACAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTATTTGGCAAGGCTCCAAATGATTTCCCCCATGCTCTCCGATCACAGATCCTTAACTGGTTATCCCATAGTCCCACTGAGATAGAGAGCTATATAAGGCCTGGCTGTATCATATTAACTGTATATCTCCGTCTAGAAAATTCCGCTTGGGAAGAGCTATGCTATAATCTAGGATCCAGCTTGAGAAAACTTGCTATGCTGAATGATTCTTTTTGGAGAACAGGATGGATATATACAAGAGTGCAGCAGTCGGTAGCTTTTCTGTATAATGGTCAGGTGGTCATAGATGTACCATTGCGATTCAAAAGTCCACAGAATTGTCAAATTTTTTGTGTTAAACCACTTGCTGTTTCTTCAAGTTCTTGTGTTCAATTTATTGTGAAAGGATTCAACCTTTTGCTGTCCAACACCAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAAGAAAGTTGTTATGATTTGGTTGATGCTGATGCTGCCATTGGACGTCATGAGCTTCAGCATCTGAGCTTCTCTTGTTGTATACCAAATGTGGCTGGAAGAGGGTTTATTGAGGTGGAAGATAATGGTCTTAGCAGCTGTTCCTTTCCATTCATAGTTGCAGAGCAAGAAATTTGTTCAGAGATATGTAAGCTGGAGAATGTCATTGAGGCAGCTGAGACTGCTGATGACATCCAAATGAAAACTAAACGAATGGAAGAAAAGACTCAAGCATTGTATTTCATACAGGAAATGGGTTGGCTCCTTCACAGAAACCGTGTGAAAGTTCGGCTAGGTCCTGTGGCACCTGTACAAGATTGCTTCCATTTTAATCGGTTCGTGTGGCTTGTTGGCTTCTCTATGGACCATGACTGGTGTGCTGTGATGAAAAAGCTCTTGAACATTATCTTTGAGGGCACTGTTGATATAGGAGAGCATACCTCAGTTGAGTTAGCATTGTTAGAGATGGATCTTCTGCACAAAGCGGTAAAAAGAAATTGCAGGCCTATGGTGGAACTACTGTTAAAATTTGTGCCAGTTAATGCTTCAGATGGTGGAGACAGTAAAGAGCAGCAAGTCAACAAGTCCCCTAACAGATTCATATTCAGACCTGATTCAGTTGGGCCGGCTGGGTTGACTCCCCTTCATGTTGCAGCAAGTATACATGGTTCAGATAATGTATTGGATGCATTAACTGATGATCCAGGACTGGTGGGAATTGAGGCATGGAAAAGTGCTCAGGACACTACAGGTTTGACCCCTTATGACCATGCATCCCTGCGAGGCCACTACTCCTACATTCAACTTGTCCAGAGGAAAATAAGCAACACATGCAAAAGTGAACATGTGCTTAATATCCCAGGCACTCTTGTAGATAGTAACATAAAGCAGAAGCAATCAGATGGACATAGGTCATCAAAAGTTTCAAGTTTACAAACTGAGAAGATTGAAACAACAGCAATGCTGCGACATTGTGGGCTATGCCAGCACAAGTTGGCGTATGGTGGTGTGAGAACTGCACTGGTTTATAGGCCAGCAATGCTGTCAATGGTTGCCATTGCAGCTGTGTGTGTCTGCGTGGCTTTGCTCTTCAAAAGCTCACCCAAAGTCTATTATGTATTCCAGCCATTCAGTTGGGAATCATTGGAATATGGGTCTATGTAA 3096 0.4299 MEAQLEGKNQYLYGPVVPEMKSVGKRSLEWDLNDWKWDGDLFTATQLNSVPSDCRSRQPFPADPEILASGGASNNLSSAHDDVNLAEGRRELEKRRRGVADEGGLEMNDGAGSLNLNLGVQVYPIIEGEEKSGKKTKITGSTLNRAVCQVEDCRADLSSAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDASVLNDGSVNEEKGSSYLLMSLLRILSNMHSNGSDNMTSQDVLSHLLRNLASVAGTINGRNIVSLLEGSQDLVKAGTSGTAQNVPNTNSNGPETSRPFDTSTKMDNGLINQDPPESMVQCELTPANGMTKRFIASGSDGVGSSKSPSLPQPSNVLLSRNSFPPHSVSEEPTVGRIGLSNIDLNSAYDDVQDYVENTRNSRPPLPSGNGSLDHPLWIQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPGCIILTVYLRLENSAWEELCYNLGSSLRKLAMLNDSFWRTGWIYTRVQQSVAFLYNGQVVIDVPLRFKSPQNCQIFCVKPLAVSSSSCVQFIVKGFNLLLSNTRLLCALEGKYLVQESCYDLVDADAAIGRHELQHLSFSCCIPNVAGRGFIEVEDNGLSSCSFPFIVAEQEICSEICKLENVIEAAETADDIQMKTKRMEEKTQALYFIQEMGWLLHRNRVKVRLGPVAPVQDCFHFNRFVWLVGFSMDHDWCAVMKKLLNIIFEGTVDIGEHTSVELALLEMDLLHKAVKRNCRPMVELLLKFVPVNASDGGDSKEQQVNKSPNRFIFRPDSVGPAGLTPLHVAASIHGSDNVLDALTDDPGLVGIEAWKSAQDTTGLTPYDHASLRGHYSYIQLVQRKISNTCKSEHVLNIPGTLVDSNIKQKQSDGHRSSKVSSLQTEKIETTAMLRHCGLCQHKLAYGGVRTALVYRPAMLSMVAIAAVCVCVALLFKSSPKVYYVFQPFSWESLEYGSM* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03636 1031 SUPERFAMILY SBT domain 146 226 IPR036893 GO:0003677|GO:0005634
Phac9g03636 1031 MobiDBLite consensus disorder prediction 361 391 - -
Phac9g03636 1031 MobiDBLite consensus disorder prediction 446 474 - -
Phac9g03636 1031 ProSiteProfiles Zinc finger SBP-type profile. 145 222 IPR004333 GO:0003677
Phac9g03636 1031 MobiDBLite consensus disorder prediction 356 397 - -
Phac9g03636 1031 MobiDBLite consensus disorder prediction 301 330 - -
Phac9g03636 1031 MobiDBLite consensus disorder prediction 212 233 - -
Phac9g03636 1031 Gene3D - 788 959 IPR036770 -
Phac9g03636 1031 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 72 915 IPR044817 GO:0003677
Phac9g03636 1031 Pfam SBP domain 148 221 IPR004333 GO:0003677
Phac9g03636 1031 SUPERFAMILY Ankyrin repeat 802 916 IPR036770 -
Phac9g03636 1031 Gene3D - 140 209 IPR036893 GO:0003677|GO:0005634
Phac9g03636 1031 FunFam Squamosa promoter-binding-like protein 14 139 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03636 Phac-Chr9 35538410 35550015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03636 1 1030 SBP-box Gene Family AT3G60030 45.636 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac9g03636 SBP 6.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03636 - - gmx:100776125 1778.45