Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g03621 | ATGAGGAGCCAACTGGTGTGTAATGGGTGTAGGAACATCTTGGTTTACCCTAGAGGAGCAACCAATGTTTGCTGTGCATTGTGCACCACCGTTTCCTCTGTTCCTCCTCCTGGAATGGAAATGTCACAACTTTATTGTGGAGGCTGTAGGACATTGCTAATGTACGCACGTGGTGCTTCAAGTGTGAGATGTTCCTGCTGTTACACTATAAACCTTGTACCCGAATGTAATCAAGTCAGCCATATCCATTGTGTGAACTGCCGGACCACACTCATGTATCCTTTTGGAGCTCCCTCAGTCAAATGTGCGATTTGTCACTATATTACTAATGTCAGTATGACCAATGGAAGGCTTCCAGTTCCTGTACAGAGACCAAATGGAACAGTATCTACTACTTCATCATCAATGCCTCATTCTCAGAGTCAAACTGTCGTAGTAGAAAATCCTATGTCTGTTGATTCGAGTGGGAAATTGGTGAGCAATGTTGTTGTGGGCGTTACAACTGATAAGAAATGA | 516 | 0.438 | MRSQLVCNGCRNILVYPRGATNVCCALCTTVSSVPPPGMEMSQLYCGGCRTLLMYARGASSVRCSCCYTINLVPECNQVSHIHCVNCRTTLMYPFGAPSVKCAICHYITNVSMTNGRLPVPVQRPNGTVSTTSSSMPHSQSQTVVVENPMSVDSSGKLVSNVVVGVTTDKK* | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g03621 | 171 | PANTHER | PROTEIN LSD1 | 3 | 170 | IPR040319 | - | |
Phac9g03621 | 171 | Pfam | LSD1 zinc finger | 7 | 31 | IPR005735 | - | |
Phac9g03621 | 171 | Pfam | LSD1 zinc finger | 46 | 70 | IPR005735 | - | |
Phac9g03621 | 171 | Pfam | LSD1 zinc finger | 84 | 108 | IPR005735 | - | |
Phac9g03621 | 171 | NCBIfam | zinc finger domain, LSD1 subclass | 4 | 32 | IPR005735 | - | |
Phac9g03621 | 171 | NCBIfam | zinc finger domain, LSD1 subclass | 81 | 110 | IPR005735 | - | |
Phac9g03621 | 171 | NCBIfam | zinc finger domain, LSD1 subclass | 43 | 73 | IPR005735 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g03621 | Phac-Chr9 | 35455411 | 35460791 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-LSD | Phac9g03621 | zf-LSD1 | 1.6e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g03621 | - | K12191 | gmx:100792570 | 300.827 |